Module.cc

/**************************************************************************
 * BASF2 (Belle Analysis Framework 2)                                     *
 * Copyright(C) 2010 - Belle II Collaboration                             *
 *                                                                        *
 * Author: The Belle II Collaboration                                     *
 * Contributors: Andreas Moll, Martin Heck                                *
 *                                                                        *
 * This software is provided "as is" without any warranty.                *
 **************************************************************************/
 
#include <boost/python/register_ptr_to_python.hpp>
#include <boost/python/class.hpp>
#include <boost/python/list.hpp>
#include <boost/python/dict.hpp>
#include <boost/python/copy_const_reference.hpp>
#include <boost/python/overloads.hpp>
#include <boost/python/enum.hpp>
#include <boost/python/docstring_options.hpp>
#include <utility>
 
#include <framework/core/Module.h>
#include <framework/core/ModuleCondition.h>
#include <framework/core/PyModule.h>
#include <framework/core/ModuleManager.h>
#include <framework/core/Path.h>
 
#include <framework/logging/Logger.h>
 
using namespace Belle2;
using namespace boost::python;
 
Module::Module() :
  m_name(),
  m_type(),
  m_description("Not set by the author"),
  m_propertyFlags(0),
  m_logConfig(),
  m_hasReturnValue(false),
  m_returnValue(0)
{
}
 
const std::string& Module::getType() const
{
  if (m_type.empty())
    B2FATAL("Module type not set for " << getName());
  return m_type;
}
 
void Module::setType(const std::string& type)
{
  if (!m_type.empty())
    B2FATAL("Trying to change module type from " << m_type << " is not allowed, the value is assumed to be fixed.");
  m_type = type;
}
 
void Module::setLogLevel(int logLevel)
{
  m_logConfig.setLogLevel(static_cast<LogConfig::ELogLevel>(logLevel));
}
 
 
void Module::setDebugLevel(int debugLevel)
{
  m_logConfig.setDebugLevel(debugLevel);
}
 
 
void Module::setAbortLevel(int abortLevel)
{
  m_logConfig.setAbortLevel(static_cast<LogConfig::ELogLevel>(abortLevel));
}
 
 
void Module::setLogInfo(int logLevel, unsigned int logInfo)
{
  m_logConfig.setLogInfo(static_cast<LogConfig::ELogLevel>(logLevel), logInfo);
}
 
 
void Module::if_value(const std::string& expression, const std::shared_ptr<Path>& path, EAfterConditionPath afterConditionPath)
{
  m_conditions.emplace_back(expression, path, afterConditionPath);
}
 
 
void Module::if_false(const std::shared_ptr<Path>& path, EAfterConditionPath afterConditionPath)
{
  if_value("<1", path, afterConditionPath);
}
 
void Module::if_true(const std::shared_ptr<Path>& path, EAfterConditionPath afterConditionPath)
{
  if_value(">=1", path, afterConditionPath);
}
 
 
bool Module::evalCondition() const
{
  if (m_conditions.empty()) return false;
 
  //okay, a condition was set for this Module...
  if (!m_hasReturnValue) {
    B2FATAL("A condition was set for '" << getName() << "', but the module did not set a return value!");
  }
 
  for (const auto& condition : m_conditions) {
    if (condition.evaluate(m_returnValue)) {
      return true;
    }
  }
  return false;
}
 
std::shared_ptr<Path> Module::getConditionPath() const
{
  PathPtr p;
  if (m_conditions.empty()) return p;
 
  //okay, a condition was set for this Module...
  if (!m_hasReturnValue) {
    B2FATAL("A condition was set for '" << getName() << "', but the module did not set a return value!");
  }
 
  for (const auto& condition : m_conditions) {
    if (condition.evaluate(m_returnValue)) {
      return condition.getPath();
    }
  }
 
  // if none of the conditions were true, return a null pointer.
  return p;
}
 
Module::EAfterConditionPath Module::getAfterConditionPath() const
{
  if (m_conditions.empty()) return EAfterConditionPath::c_End;
 
  //okay, a condition was set for this Module...
  if (!m_hasReturnValue) {
    B2FATAL("A condition was set for '" << getName() << "', but the module did not set a return value!");
  }
 
  for (const auto& condition : m_conditions) {
    if (condition.evaluate(m_returnValue)) {
      return condition.getAfterConditionPath();
    }
  }
 
  return EAfterConditionPath::c_End;
}
std::vector<std::shared_ptr<Path>> Module::getAllConditionPaths() const
{
  std::vector<std::shared_ptr<Path>> allConditionPaths;
  for (const auto& condition : m_conditions) {
    allConditionPaths.push_back(condition.getPath());
  }
 
  return allConditionPaths;
}
 
bool Module::hasProperties(unsigned int propertyFlags) const
{
  return (propertyFlags & m_propertyFlags) == propertyFlags;
}
 
 
bool Module::hasUnsetForcedParams() const
{
  auto missing = m_moduleParamList.getUnsetForcedParams();
  std::string allMissing = "";
  for (const auto& s : missing)
    allMissing += s + " ";
  if (!missing.empty())
    B2ERROR("The following required parameters of Module '" << getName() << "' were not specified: " << allMissing <<
            "\nPlease add them to your steering file.");
  return !missing.empty();
}
 
 
std::shared_ptr<PathElement> Module::clone() const
{
  ModulePtr newModule = ModuleManager::Instance().registerModule(getType());
  newModule->m_moduleParamList.setParameters(getParamList());
  newModule->setName(getName());
  newModule->m_package = m_package;
  newModule->m_propertyFlags = m_propertyFlags;
  newModule->m_logConfig = m_logConfig;
  newModule->m_conditions = m_conditions;
 
  return newModule;
}
 
std::string Module::getPathString() const
{
 
  std::string output = getName();
 
  for (const auto& condition : m_conditions) {
    output += condition.getString();
  }
 
  return output;
}
 
//============================================================================
//                          Protected methods
//============================================================================
 
void Module::setPropertyFlags(unsigned int propertyFlags)
{
  m_propertyFlags = propertyFlags;
}
 
 
void Module::setDescription(const std::string& description)
{
  m_description = description;
}
 
 
void Module::setReturnValue(int value)
{
  m_hasReturnValue = true;
  m_returnValue = value;
}
 
 
void Module::setReturnValue(bool value)
{
  m_hasReturnValue = true;
  m_returnValue = value;
}
 
 
void Module::setParamPython(const std::string& name, const boost::python::object& pyObj)
{
  LogSystem& logSystem = LogSystem::Instance();
  logSystem.updateModule(&(getLogConfig()), getName());
  try {
    m_moduleParamList.setParamPython(name, pyObj);
  } catch (std::runtime_error& e) {
    throw std::runtime_error("Cannot set parameter '" + name + "' for module '"
                             + m_name + "': " + e.what());
  }
 
  logSystem.updateModule(nullptr);
}
 
 
void Module::setParamPythonDict(const boost::python::dict& dictionary)
{
 
  LogSystem& logSystem = LogSystem::Instance();
  logSystem.updateModule(&(getLogConfig()), getName());
 
  boost::python::list dictKeys = dictionary.keys();
  int nKey = boost::python::len(dictKeys);
 
  //Loop over all keys in the dictionary
  for (int iKey = 0; iKey < nKey; ++iKey) {
    boost::python::object currKey = dictKeys[iKey];
    boost::python::extract<std::string> keyProxy(currKey);
 
    if (keyProxy.check()) {
      const boost::python::object& currValue = dictionary[currKey];
      setParamPython(keyProxy, currValue);
    } else {
      B2ERROR("Setting the module parameters from a python dictionary: invalid key in dictionary!");
    }
  }
 
  logSystem.updateModule(nullptr);
}
 
 
//=====================================================================
//                          Python API
//=====================================================================
 
std::shared_ptr<boost::python::list> Module::getParamInfoListPython() const
{
  return m_moduleParamList.getParamInfoListPython();
}
 
namespace {
  boost::python::list _getParamInfoListPython(const Module* m)
  {
    return *(m->getParamInfoListPython().get()); //copy the list object
  }
  boost::python::list _getAllConditionPathsPython(const Module* m)
  {
    boost::python::list allConditionPaths;
    for (const auto& conditionPath : m->getAllConditionPaths()) {
      allConditionPaths.append(boost::python::object(conditionPath));
    }
 
    return allConditionPaths;
  }
  boost::python::list _getAllConditionsPython(const Module* m)
  {
    boost::python::list allConditions;
    for (const auto& condition : m->getAllConditions()) {
      allConditions.append(boost::python::object(boost::ref(condition)));
    }
 
    return allConditions;
  }
}
 
#if !defined(__GNUG__) || defined(__ICC)
#else
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wunused-local-typedefs"
#endif
// cppcheck-suppress unknownMacro
BOOST_PYTHON_MEMBER_FUNCTION_OVERLOADS(if_value_overloads, if_value, 2, 3)
BOOST_PYTHON_MEMBER_FUNCTION_OVERLOADS(if_false_overloads, if_false, 1, 2)
BOOST_PYTHON_MEMBER_FUNCTION_OVERLOADS(if_true_overloads, if_true, 1, 2)
#if !defined(__GNUG__) || defined(__ICC)
#else
#pragma GCC diagnostic pop
#endif
 
 
void Module::exposePythonAPI()
{
  // to avoid confusion between std::arg and boost::python::arg we want a shorthand namespace as well
  namespace bp = boost::python;
 
  docstring_options options(true, true, false); //userdef, py sigs, c++ sigs
 
  void (Module::*setReturnValueInt)(int) = &Module::setReturnValue;
 
  enum_<Module::EAfterConditionPath>("AfterConditionPath",
                                     R"(Determines execution behaviour after a conditional path has been executed:
 
.. attribute:: END
 
  End processing of this path after the conditional path. (this is the default for if_value() etc.)
 
.. attribute:: CONTINUE
 
  After the conditional path, resume execution after this module.)")
  .value("END", Module::EAfterConditionPath::c_End)
  .value("CONTINUE", Module::EAfterConditionPath::c_Continue)
  ;
 
  /* Do not change the names of >, <, ... we use them to serialize conditional pathes */
  enum_<Belle2::ModuleCondition::EConditionOperators>("ConditionOperator")
  .value(">", Belle2::ModuleCondition::EConditionOperators::c_GT)
  .value("<", Belle2::ModuleCondition::EConditionOperators::c_ST)
  .value(">=", Belle2::ModuleCondition::EConditionOperators::c_GE)
  .value("<=", Belle2::ModuleCondition::EConditionOperators::c_SE)
  .value("==", Belle2::ModuleCondition::EConditionOperators::c_EQ)
  .value("!=", Belle2::ModuleCondition::EConditionOperators::c_NE)
  ;
 
  enum_<Module::EModulePropFlags>("ModulePropFlags",
                                  R"(Flags to indicate certain low-level features of modules, see :func:`Module.set_property_flags()`, :func:`Module.has_properties()`. Most useful flags are:
 
.. attribute:: PARALLELPROCESSINGCERTIFIED
 
    This module can be run in parallel processing mode safely (All I/O must be done through the data store, in particular, the module must not write any files.)
 
.. attribute:: HISTOGRAMMANAGER
 
  This module is used to manage histograms accumulated by other modules
 
.. attribute:: TERMINATEINALLPROCESSES
 
  When using parallel processing, call this module's terminate() function in all processes. This will also ensure that there is exactly one process (single-core if no parallel modules found) or at least one input, one main and one output process.
)")
  .value("INPUT", Module::EModulePropFlags::c_Input)
  .value("OUTPUT", Module::EModulePropFlags::c_Output)
  .value("PARALLELPROCESSINGCERTIFIED", Module::EModulePropFlags::c_ParallelProcessingCertified)
  .value("HISTOGRAMMANAGER", Module::EModulePropFlags::c_HistogramManager)
  .value("INTERNALSERIALIZER", Module::EModulePropFlags::c_InternalSerializer)
  .value("TERMINATEINALLPROCESSES", Module::EModulePropFlags::c_TerminateInAllProcesses)
  ;
 
  //Python class definition
  class_<Module, PyModule> module("Module", R"(
Base class for Modules.
 
A module is the smallest building block of the framework.
A typical event processing chain consists of a Path containing
modules. By inheriting from this base class, various types of
modules can be created. To use a module, please refer to
:func:`Path.add_module()`.  A list of modules is available by running
``basf2 -m`` or ``basf2 -m package``, detailed information on parameters is
given by e.g. ``basf2 -m RootInput``.
 
The 'Module Development' section in the manual provides detailed information
on how to create modules, setting parameters, or using return values/conditions:
https://confluence.desy.de/display/BI/Software+Basf2manual#Module_Development
 
)");
  module
  .def("__str__", &Module::getPathString)
  .def("name", &Module::getName, return_value_policy<copy_const_reference>(),
       "Returns the name of the module. Can be changed via :func:`set_name() <Module.set_name()>`, use :func:`type() <Module.type()>` for identifying a particular module class.")
  .def("type", &Module::getType, return_value_policy<copy_const_reference>(),
       "Returns the type of the module (i.e. class name minus 'Module')")
  .def("set_name", &Module::setName, args("name"), R"(
Set custom name, e.g. to distinguish multiple modules of the same type.
 
>>> path.add_module('EventInfoSetter')
>>> ro = path.add_module('RootOutput', branchNames=['EventMetaData'])
>>> ro.set_name('RootOutput_metadata_only')
>>> print(path)
[EventInfoSetter -> RootOutput_metadata_only]
 
)")
  .def("description", &Module::getDescription, return_value_policy<copy_const_reference>(),
       "Returns the description of this module.")
  .def("package", &Module::getPackage, return_value_policy<copy_const_reference>(),
       "Returns the package this module belongs to.")
  .def("available_params", &_getParamInfoListPython,
       "Return list of all module parameters as `ModuleParamInfo` instances")
  .def("has_properties", &Module::hasProperties, (bp::arg("properties")),
       R"DOCSTRING(Allows to check if the module has the given properties out of `ModulePropFlags` set.
 
>>> if module.has_properties(ModulePropFlags.PARALLELPROCESSINGCERTIFIED):
>>>     ...
 
Parameters:
  properties (int): bitmask of `ModulePropFlags` to check for.
)DOCSTRING")
  .def("set_property_flags", &Module::setPropertyFlags, args("property_mask"),
       "Set module properties in the form of an OR combination of `ModulePropFlags`.");
  {
    // python signature is too crowded, make ourselves
    docstring_options subOptions(true, false, false); //userdef, py sigs, c++ sigs
    module
    .def("if_value", &Module::if_value,
         (bp::arg("expression"), bp::arg("condition_path"), bp::arg("after_condition_path")= Module::EAfterConditionPath::c_End),
         R"DOCSTRING(if_value(expression, condition_path, after_condition_path=AfterConditionPath.END)
 
Sets a conditional sub path which will be executed after this
module if the return value set in the module passes the given ``expression``.
 
Modules can define a return value (int or bool) using ``setReturnValue()``,
which can be used in the steering file to split the Path based on this value, for example
 
>>> module_with_condition.if_value("<1", another_path)
 
In case the return value of the ``module_with_condition`` for a given event is
less than 1, the execution will be diverted into ``another_path`` for this event.
 
You could for example set a special return value if an error occurs, and divert
the execution into a path containing :b2:mod:`RootOutput` if it is found;
saving only the data producing/produced by the error.
 
After a conditional path has executed, basf2 will by default stop processing
the path for this event. This behaviour can be changed by setting the
``after_condition_path`` argument.
 
Parameters:
  expression (str): Expression to determine if the conditional path should be executed.
      This should be one of the comparison operators ``<``, ``>``, ``<=``,
      ``>=``, ``==``, or ``!=`` followed by a numerical value for the return value
  condition_path (Path): path to execute in case the expression is fulfilled
  after_condition_path (AfterConditionPath): What to do once the ``condition_path`` has been executed.
)DOCSTRING")
    .def("if_false", &Module::if_false,
         (bp::arg("condition_path"), bp::arg("after_condition_path")= Module::EAfterConditionPath::c_End),
         R"DOC(if_false(condition_path, after_condition_path=AfterConditionPath.END)
 
Sets a conditional sub path which will be executed after this module if
the return value of the module evaluates to False. This is equivalent to
calling `if_value` with ``expression=\"<1\"``)DOC")
    .def("if_true", &Module::if_true,
         (bp::arg("condition_path"), bp::arg("after_condition_path")= Module::EAfterConditionPath::c_End),
         R"DOC(if_true(condition_path, after_condition_path=AfterConditionPath.END)
 
Sets a conditional sub path which will be executed after this module if
the return value of the module evaluates to True. It is equivalent to
calling `if_value` with ``expression=\">=1\"``)DOC");
  }
  module
  .def("has_condition", &Module::hasCondition,
       "Return true if a conditional path has been set for this module "
       "using `if_value`, `if_true` or `if_false`")
  .def("get_all_condition_paths", &_getAllConditionPathsPython,
       "Return a list of all conditional paths set for this module using "
       "`if_value`, `if_true` or `if_false`")
  .def("get_all_conditions", &_getAllConditionsPython,
       "Return a list of all conditional path expressions set for this module using "
       "`if_value`, `if_true` or `if_false`")
  .add_property("logging", make_function(&Module::getLogConfig, return_value_policy<reference_existing_object>()),
                &Module::setLogConfig)
  .def("return_value", setReturnValueInt, bp::arg("value"), \
       "Set a return value. Can be used by custom modules to set the return value "
       "used to determine if conditional paths are executed")
  .def("set_log_level", &Module::setLogLevel, bp::arg("log_level"),
       "Set the log level for this module. Messages below that level will be suppressed\n\n"
       "Parameters:\n  log_level (LogLevel): Minimum level for messages to be displayed")
  .def("set_debug_level", &Module::setDebugLevel, bp::arg("debug_level"),
       "Set the debug level for this module. Debug messages with a higher level will "
       "be suppressed. This function has no visible effect if the log level is "
       "not set to `DEBUG <LogLevel.DEBUG>`\n\n"
       "Parameters:\n  debug_level (int): Maximum debug level for messages to be displayed.")
  .def("set_abort_level", &Module::setAbortLevel, bp::arg("abort_level"),
       "Set the log level which will cause processing to be aborted. Usually "
       "processing is only aborted for `FATAL <LogLevel.FATAL>` messages "
       "but with this function it's possible to set this to a lower value\n\n"
       "Parameters:\n  abort_level (LogLevel): log level which will cause processing to be aborted.")
  .def("set_log_info", &Module::setLogInfo, args("log_info"),
       "Set a `LogInfo` configuration object for this module to determine how log messages should be formatted")
  //tell python about the default implementations of virtual functions
  .def("initialize", &Module::def_initialize,
       "This function is called by the processing just once before processing any data "
       "is processed. Modules can override this method to perform some actions at "
       "startup once all parameters are set")
  .def("beginRun", &Module::def_beginRun,
       "This function is called by the processing just before a new run of data "
       "is processed. Modules can override this method to perform actions which "
       "are run dependent")
  .def("event", &Module::def_event,
       "This function is called by the processing once for each event."
       "Modules should override this method to perform actions during event processing")
  .def("endRun", &Module::def_endRun,
       "This function is called by the processing just after a new run of data "
       "is processed. Modules can override this method to perform actions which "
       "are run dependent")
  .def("terminate", &Module::def_terminate,
       "This function is called by the processing once after all data "
       "is processed. Modules can override this method to perform some cleanup at "
       "shutdown. The terminate functions of all modules are called in reverse "
       "order of the `initialize` calls.")
  ;
  {
    // The param function is overloaded with different signatures which makes
    // the boost docstring very useless so we handcraft a docstring
    docstring_options param_options(true, false, false); //userdef, py sigs, c++ sigs
    module
    .def("param", &Module::setParamPython)
    .def("param", &Module::setParamPythonDict, R"DOCSTRING(param(key, value=None)
This method can be used to set module parameters. There are two ways of
calling this function:
 
1. With two arguments where the first is the name of the parameter and the second is the value.
 
   >>> module.param("parameterName", "parameterValue")
 
2. Or with just one parameter which is a dictionary mapping multiple parameter names to their values
 
   >>> module.param({"parameter1": "value1", "parameter2": True})
)DOCSTRING")
    ;
  }
 
  register_ptr_to_python<ModulePtr>();
}
 
//=====================================================================
//                          ModuleProxyBase
//=====================================================================
 
ModuleProxyBase::ModuleProxyBase(std::string  moduleType, std::string  package) : m_moduleType(std::move(moduleType)),
  m_package(std::move(package))
{
  ModuleManager::Instance().registerModuleProxy(this);
}