Belle II Software development
CDCDedx1DCellAlgorithm Class Reference

A calibration algorithm for CDC dE/dx electron: 1D enta cleanup correction. More...

#include <CDCDedx1DCellAlgorithm.h>

Inheritance diagram for CDCDedx1DCellAlgorithm:
CalibrationAlgorithm

Public Types

enum  EResult {
  c_OK ,
  c_Iterate ,
  c_NotEnoughData ,
  c_Failure ,
  c_Undefined
}
 The result of calibration. More...
 

Public Member Functions

 CDCDedx1DCellAlgorithm ()
 Constructor: Sets the description, the properties and the parameters of the algorithm.
 
virtual ~CDCDedx1DCellAlgorithm ()
 Destructor.
 
void setSuffix (const std::string &value)
 adding suffix to control plots
 
void setVariableBins (bool value)
 Set Var bins flag to on or off.
 
void setLayerTrunc (bool value=false)
 funtion to set truncation method (local vs global)
 
void setMergePayload (bool value)
 set false if generating absoulte (not relative) payload
 
void setSplitFactor (int value)
 set bin split factor for all range
 
void setRotSymmetry (bool value)
 set rotation sys to copy constants from one region to other
 
void setTrucationBins (double lowedge, double upedge)
 function to set bins of trunction from histogram
 
void enableExtraPlots (bool value=false)
 function to set flag active for plotting
 
void setPtLimit (double value)
 funtion to set pt limit
 
void setCosLimit (double value)
 funtion to set cos #theta limit
 
void setBaselineFactor (double charge, double factor)
 adjust baseline based on charge or global overall works for only single charge or both
 
int rotationalBin (int nbin, int ibin)
 class funtion to set rotation symmetry
 
void getExpRunInfo ()
 function to get extract calibration run/exp
 
void CreateBinMapping ()
 class function to create vectors for bin mappping (Var->symm)
 
void defineHisto (std::vector< TH1D * > hdedxhit[2], TH1D *hdedxlay[2], TH1D *hentalay[2])
 function to define histograms
 
void getTruncatedBins (TH1D *hist, int &binlow, int &binhigh)
 function to get bins of trunction from histogram
 
double getTruncationMean (TH1D *hist, int binlow, int binhigh)
 function to get truncated mean
 
void createPayload ()
 funtion to generate final constants
 
void plotMergeFactor (std::map< int, std::vector< double > > bounds, const std::array< int, 2 > nDev, std::map< int, std::vector< int > > steps)
 funtion to plot merging factor
 
void plotdedxHist (std::vector< TH1D * > hdedxhit[2])
 function to draw the dE/dx histrogram in enta bins
 
void plotLayerDist (TH1D *hdedxL[2])
 funtion to draw dedx dist.
 
void plotQaPars (TH1D *hentalay[2], TH2D *hptcosth)
 funtion to draw pt vs costh and entrance angle distribution for Inner/Outer layer
 
void plotRelConst (std::vector< double >tempconst, std::vector< double >layerconst, int il)
 function to draw symm/Var layer constant
 
void plotConstants ()
 function to draw the old/new final constants
 
void plotEventStats ()
 function to draw the stats plots
 
std::string getPrefix () const
 Get the prefix used for getting calibration data.
 
bool checkPyExpRun (PyObject *pyObj)
 Checks that a PyObject can be successfully converted to an ExpRun type.
 
Calibration::ExpRun convertPyExpRun (PyObject *pyObj)
 Performs the conversion of PyObject to ExpRun.
 
std::string getCollectorName () const
 Alias for prefix.
 
void setPrefix (const std::string &prefix)
 Set the prefix used to identify datastore objects.
 
void setInputFileNames (PyObject *inputFileNames)
 Set the input file names used for this algorithm from a Python list.
 
PyObject * getInputFileNames ()
 Get the input file names used for this algorithm and pass them out as a Python list of unicode strings.
 
std::vector< Calibration::ExpRun > getRunListFromAllData () const
 Get the complete list of runs from inspection of collected data.
 
RunRange getRunRangeFromAllData () const
 Get the complete RunRange from inspection of collected data.
 
IntervalOfValidity getIovFromAllData () const
 Get the complete IoV from inspection of collected data.
 
void fillRunToInputFilesMap ()
 Fill the mapping of ExpRun -> Files.
 
std::string getGranularity () const
 Get the granularity of collected data.
 
EResult execute (std::vector< Calibration::ExpRun > runs={}, int iteration=0, IntervalOfValidity iov=IntervalOfValidity())
 Runs calibration over vector of runs for a given iteration.
 
EResult execute (PyObject *runs, int iteration=0, IntervalOfValidity iov=IntervalOfValidity())
 Runs calibration over Python list of runs. Converts to C++ and then calls the other execute() function.
 
std::list< Database::DBImportQuery > & getPayloads ()
 Get constants (in TObjects) for database update from last execution.
 
std::list< Database::DBImportQuerygetPayloadValues ()
 Get constants (in TObjects) for database update from last execution but passed by VALUE.
 
bool commit ()
 Submit constants from last calibration into database.
 
bool commit (std::list< Database::DBImportQuery > payloads)
 Submit constants from a (potentially previous) set of payloads.
 
const std::string & getDescription () const
 Get the description of the algoithm (set by developers in constructor)
 
bool loadInputJson (const std::string &jsonString)
 Load the m_inputJson variable from a string (useful from Python interface). The rturn bool indicates success or failure.
 
const std::string dumpOutputJson () const
 Dump the JSON string of the output JSON object.
 
const std::vector< Calibration::ExpRun > findPayloadBoundaries (std::vector< Calibration::ExpRun > runs, int iteration=0)
 Used to discover the ExpRun boundaries that you want the Python CAF to execute on. This is optional and only used in some.
 
template<>
std::shared_ptr< TTree > getObjectPtr (const std::string &name, const std::vector< Calibration::ExpRun > &requestedRuns)
 Specialization of getObjectPtr<TTree>.
 

Protected Member Functions

virtual EResult calibrate () override
 1D cell algorithm
 
void setInputFileNames (std::vector< std::string > inputFileNames)
 Set the input file names used for this algorithm.
 
virtual bool isBoundaryRequired (const Calibration::ExpRun &)
 Given the current collector data, make a decision about whether or not this run should be the start of a payload boundary.
 
virtual void boundaryFindingSetup (std::vector< Calibration::ExpRun >, int)
 If you need to make some changes to your algorithm class before 'findPayloadBoundaries' is run, make them in this function.
 
virtual void boundaryFindingTearDown ()
 Put your algorithm back into a state ready for normal execution if you need to.
 
const std::vector< Calibration::ExpRun > & getRunList () const
 Get the list of runs for which calibration is called.
 
int getIteration () const
 Get current iteration.
 
std::vector< std::string > getVecInputFileNames () const
 Get the input file names used for this algorithm as a STL vector.
 
template<class T >
std::shared_ptr< T > getObjectPtr (const std::string &name, const std::vector< Calibration::ExpRun > &requestedRuns)
 Get calibration data object by name and list of runs, the Merge function will be called to generate the overall object.
 
template<class T >
std::shared_ptr< T > getObjectPtr (std::string name)
 Get calibration data object (for all runs the calibration is requested for) This function will only work during or after execute() has been called once.
 
template<>
shared_ptr< TTree > getObjectPtr (const string &name, const vector< ExpRun > &requestedRuns)
 We cheekily cast the TChain to TTree for the returned pointer so that the user never knows Hopefully this doesn't cause issues if people do low level stuff to the tree...
 
std::string getGranularityFromData () const
 Get the granularity of collected data.
 
void saveCalibration (TClonesArray *data, const std::string &name)
 Store DBArray payload with given name with default IOV.
 
void saveCalibration (TClonesArray *data, const std::string &name, const IntervalOfValidity &iov)
 Store DBArray with given name and custom IOV.
 
void saveCalibration (TObject *data)
 Store DB payload with default name and default IOV.
 
void saveCalibration (TObject *data, const IntervalOfValidity &iov)
 Store DB payload with default name and custom IOV.
 
void saveCalibration (TObject *data, const std::string &name)
 Store DB payload with given name with default IOV.
 
void saveCalibration (TObject *data, const std::string &name, const IntervalOfValidity &iov)
 Store DB payload with given name and custom IOV.
 
void updateDBObjPtrs (const unsigned int event, const int run, const int experiment)
 Updates any DBObjPtrs by calling update(event) for DBStore.
 
void setDescription (const std::string &description)
 Set algorithm description (in constructor)
 
void clearCalibrationData ()
 Clear calibration data.
 
Calibration::ExpRun getAllGranularityExpRun () const
 Returns the Exp,Run pair that means 'Everything'. Currently unused.
 
void resetInputJson ()
 Clears the m_inputJson member variable.
 
void resetOutputJson ()
 Clears the m_outputJson member variable.
 
template<class T >
void setOutputJsonValue (const std::string &key, const T &value)
 Set a key:value pair for the outputJson object, expected to used interally during calibrate()
 
template<class T >
const T getOutputJsonValue (const std::string &key) const
 Get a value using a key from the JSON output object, not sure why you would want to do this.
 
template<class T >
const T getInputJsonValue (const std::string &key) const
 Get an input JSON value using a key. The normal exceptions are raised when the key doesn't exist.
 
const nlohmann::json & getInputJsonObject () const
 Get the entire top level JSON object. We explicitly say this must be of object type so that we might pick.
 
bool inputJsonKeyExists (const std::string &key) const
 Test for a key in the input JSON object.
 

Protected Attributes

std::vector< Calibration::ExpRun > m_boundaries
 When using the boundaries functionality from isBoundaryRequired, this is used to store the boundaries. It is cleared when.
 

Private Member Functions

std::string getExpRunString (Calibration::ExpRun &expRun) const
 Gets the "exp.run" string repr. of (exp,run)
 
std::string getFullObjectPath (const std::string &name, Calibration::ExpRun expRun) const
 constructs the full TDirectory + Key name of an object in a TFile based on its name and exprun
 

Private Attributes

double m_eaMin
 lower edge of enta angle
 
double m_eaMax
 upper edge of enta angle
 
double m_eaBW
 binwdith of enta angle bin
 
int m_eaBin
 
double m_dedxMin
 lower edge of dedxhit
 
double m_dedxMax
 upper edge of dedxhit
 
int m_dedxBin
 
double m_ptMax
 a limit on transverse momentum

 
double m_cosMax
 a limit on cos theta

 
double m_truncMin
 lower thershold on truncation
 
double m_truncMax
 uppr thershold on truncation
 
int m_binSplit
 multiply nbins by this factor in full range
 
int m_binMerge
 merge bins by this factor in (-pi/2 <-> -pi/4) and (pi/4 <-> pi/2) region
 
double m_chargeType
 charge type for baseline adj
 
double m_adjustFac
 faactor with that one what to adjust baseline
 
bool isFixTrunc
 true = fix window for all out/inner layers
 
bool isVarBins
 true: if variable bin size is requested
 
bool isRotSymm
 if rotation symmtery requested
 
bool isMakePlots
 produce plots for status
 
bool isPrintLog
 print more debug information
 
bool isMerge
 print more debug information
 
std::string m_suffix
 add suffix to all plot name

 
std::string m_runExp
 add suffix to all plot name

 
std::string m_label [2] = {"IL", "OL"}
 add inner/outer layer label
 
std::vector< int > m_eaBinLocal
 
std::array< std::vector< int >, 2 > m_binIndex
 symm/Var bin numebrs
 
std::array< std::vector< double >, 2 > m_binValue
 etna Var bin values
 
std::vector< std::vector< double > > m_onedcors
 final vectors of calibration

 
DBObjPtr< CDCDedx1DCellm_DBOneDCell
 One cell correction DB object.
 
std::vector< std::string > m_inputFileNames
 List of input files to the Algorithm, will initially be user defined but then gets the wildcards expanded during execute()
 
std::map< Calibration::ExpRun, std::vector< std::string > > m_runsToInputFiles
 Map of Runs to input files. Gets filled when you call getRunRangeFromAllData, gets cleared when setting input files again.
 
std::string m_granularityOfData
 Granularity of input data. This only changes when the input files change so it isn't specific to an execution.
 
ExecutionData m_data
 Data specific to a SINGLE execution of the algorithm. Gets reset at the beginning of execution.
 
std::string m_description {""}
 Description of the algorithm.
 
std::string m_prefix {""}
 The name of the TDirectory the collector objects are contained within.
 
nlohmann::json m_jsonExecutionInput = nlohmann::json::object()
 Optional input JSON object used to make decisions about how to execute the algorithm code.
 
nlohmann::json m_jsonExecutionOutput = nlohmann::json::object()
 Optional output JSON object that can be set during the execution by the underlying algorithm code.
 

Static Private Attributes

static const Calibration::ExpRun m_allExpRun = make_pair(-1, -1)
 allExpRun
 

Detailed Description

A calibration algorithm for CDC dE/dx electron: 1D enta cleanup correction.

Definition at line 39 of file CDCDedx1DCellAlgorithm.h.

Member Enumeration Documentation

◆ EResult

enum EResult
inherited

The result of calibration.

Enumerator
c_OK 

Finished successfuly =0 in Python.

c_Iterate 

Needs iteration =1 in Python.

c_NotEnoughData 

Needs more data =2 in Python.

c_Failure 

Failed =3 in Python.

c_Undefined 

Not yet known (before execution) =4 in Python.

Definition at line 40 of file CalibrationAlgorithm.h.

40 {
41 c_OK,
42 c_Iterate,
44 c_Failure,
46 };
@ c_OK
Finished successfuly =0 in Python.
@ c_Iterate
Needs iteration =1 in Python.
@ c_NotEnoughData
Needs more data =2 in Python.
@ c_Failure
Failed =3 in Python.
@ c_Undefined
Not yet known (before execution) =4 in Python.

Constructor & Destructor Documentation

◆ CDCDedx1DCellAlgorithm()

Constructor: Sets the description, the properties and the parameters of the algorithm.

Definition at line 15 of file CDCDedx1DCellAlgorithm.cc.

15 :
16 CalibrationAlgorithm("CDCDedxElectronCollector"),
17 m_eaMin(-TMath::Pi() / 2),
18 m_eaMax(+TMath::Pi() / 2),
19 m_eaBin(316),
20 m_dedxMin(0.0),
21 m_dedxMax(5.0),
22 m_dedxBin(250),
23 m_ptMax(8.0),
24 m_cosMax(1.0),
25 m_truncMin(0.05),
26 m_truncMax(0.75),
27 m_binSplit(3),
28 m_chargeType(0),
29 m_adjustFac(1.00),
30 isFixTrunc(false),
31 isVarBins(true),
32 isRotSymm(false),
33 isMakePlots(true),
34 isPrintLog(false),
35 isMerge(true),
36 m_suffix("")
37{
38 // Set module properties
39 setDescription("A calibration algorithm for the CDC dE/dx entrance angle cleanup correction");
40}
double m_eaMax
upper edge of enta angle
double m_truncMax
uppr thershold on truncation
int m_binSplit
multiply nbins by this factor in full range
double m_truncMin
lower thershold on truncation
double m_adjustFac
faactor with that one what to adjust baseline
double m_chargeType
charge type for baseline adj
double m_cosMax
a limit on cos theta
bool isPrintLog
print more debug information
std::string m_suffix
add suffix to all plot name
double m_ptMax
a limit on transverse momentum
bool isFixTrunc
true = fix window for all out/inner layers
bool isVarBins
true: if variable bin size is requested
bool isRotSymm
if rotation symmtery requested
double m_dedxMax
upper edge of dedxhit
bool isMakePlots
produce plots for status
bool isMerge
print more debug information
double m_dedxMin
lower edge of dedxhit
double m_eaMin
lower edge of enta angle
Base class for calibration algorithms.
void setDescription(const std::string &description)
Set algorithm description (in constructor)

◆ ~CDCDedx1DCellAlgorithm()

virtual ~CDCDedx1DCellAlgorithm ( )
inlinevirtual

Destructor.

Definition at line 51 of file CDCDedx1DCellAlgorithm.h.

51{}

Member Function Documentation

◆ boundaryFindingSetup()

virtual void boundaryFindingSetup ( std::vector< Calibration::ExpRun >  ,
int   
)
inlineprotectedvirtualinherited

If you need to make some changes to your algorithm class before 'findPayloadBoundaries' is run, make them in this function.

Reimplemented in TestBoundarySettingAlgorithm, TestCalibrationAlgorithm, PXDAnalyticGainCalibrationAlgorithm, PXDValidationAlgorithm, SVD3SampleCoGTimeCalibrationAlgorithm, SVD3SampleELSTimeCalibrationAlgorithm, and SVDCoGTimeCalibrationAlgorithm.

Definition at line 252 of file CalibrationAlgorithm.h.

252{};

◆ boundaryFindingTearDown()

virtual void boundaryFindingTearDown ( )
inlineprotectedvirtualinherited

Put your algorithm back into a state ready for normal execution if you need to.

Definition at line 257 of file CalibrationAlgorithm.h.

257{};

◆ calibrate()

CalibrationAlgorithm::EResult calibrate ( )
overrideprotectedvirtual

1D cell algorithm

Implements CalibrationAlgorithm.

Definition at line 45 of file CDCDedx1DCellAlgorithm.cc.

46{
47
49
50 if (!m_DBOneDCell.isValid())
51 B2FATAL("There is no valid previous payload for CDCDedx1DCell");
52
53 //reading radiative electron collector TREE
54 auto ttree = getObjectPtr<TTree>("tree");
55 if (!ttree) return c_NotEnoughData;
56
57 std::vector<double>* dedxhit = 0, *enta = 0;
58 std::vector<int>* layer = 0;
59 double pt = 0, costh = 0;
60
61 ttree->SetBranchAddress("dedxhit", &dedxhit);
62 ttree->SetBranchAddress("entaRS", &enta);
63 ttree->SetBranchAddress("layer", &layer);
64 ttree->SetBranchAddress("pt", &pt);
65 ttree->SetBranchAddress("costh", &costh);
66
67 //repair nbins if they are not divisible accordingly
70
71 //Settings of variables bins
73
74 if (isPrintLog) {
75 B2INFO("inner layers bins: " << m_eaBinLocal[0]);
76 B2INFO("outer layers bins: " << m_eaBinLocal[1]);
77 }
78
79 // dedxhit vector to store dE/dx values for each enta bin
80 std::vector<TH1D*> hdedxhit[2];
81 TH1D* hdedxlay[2];
82 TH1D* hentalay[2];
83
84 TH2D* hptcosth = new TH2D("hptcosth", "pt vs costh dist;pt;costh", 1000, -8.0, 8.0, 1000, -1.0, 1.0);
85
86 defineHisto(hdedxhit, hdedxlay, hentalay);
87
88 //Star filling histogram defined above
89 for (int i = 0; i < ttree->GetEntries(); ++i) {
90
91 ttree->GetEvent(i);
92
93 if (abs(costh) > m_cosMax) continue;
94
95 // remove wide angle bhabha tracks
96 // double mom = pt/sqrt(1-costh*costh);
97 // if(abs(pt)<2.4 && abs(mom)>3.6)continue;
98
99 if (abs(pt) > m_ptMax) continue;
100
101 //change to random 10%
102 int rand = gRandom->Integer(100);
103 if (rand < 10) hptcosth->Fill(pt, costh);
104
105 for (unsigned int j = 0; j < dedxhit->size(); ++j) {
106
107 if (dedxhit->at(j) == 0) continue;
108
109 double entaval = enta->at(j);
110 //Mapped bin corresponds to entaval
111 int ibin = std::floor((entaval - m_eaMin) / m_eaBW);
112 if (ibin < 0 || ibin > m_eaBin) continue;
113
114 int mL = -1;
115 if (layer->at(j) < 8)mL = 0;
116 else mL = 1;
117
118 hdedxlay[mL]->Fill(dedxhit->at(j));
119 if (rand < 10) hentalay[mL]->Fill(entaval);
120
121 int jbinea = ibin;
122 if (isVarBins) jbinea = m_binIndex[mL].at(ibin);
123 hdedxhit[mL][jbinea]->Fill(dedxhit->at(j));
124 }
125 }
126
127 for (int il = 0; il < 2; il++) {
128
129 int minlay = 0, maxlay = 0;
130
131 if (isFixTrunc) {
132 getTruncatedBins(hdedxlay[il], minlay, maxlay);
133 hdedxlay[il]->SetTitle(Form("%s;%d;%d", hdedxlay[il]->GetTitle(), minlay, maxlay));
134 }
135
136 std::vector<double>tempconst;
137 tempconst.reserve(m_eaBinLocal[il]);
138
139 for (int iea = 0; iea < m_eaBinLocal[il]; iea++) {
140
141 int jea = iea;
142
143 // rotation symmtery for 1<->3 and 4<->2 but only symmetric bin
144 if (!isVarBins && isRotSymm) jea = rotationalBin(m_eaBinLocal[il], jea);
145
146 TH1D* htemp = (TH1D*)hdedxhit[il][jea]->Clone(Form("h_%s_b%d_c", m_label[il].data(), jea));
147
148 int minbin = 1, maxbin = 1;
149 if (isFixTrunc) {
150 minbin = minlay;
151 maxbin = maxlay;
152 } else {
153 //extract truncation window per bin
154 getTruncatedBins(htemp, minbin, maxbin);
155 }
156
157 double dedxmean;
158 dedxmean = getTruncationMean(htemp, minbin, maxbin);
159 tempconst.push_back(dedxmean);
160
161 hdedxhit[il][iea]->SetTitle(Form("%s, #mu_{truc} = %0.5f;%d;%d", hdedxhit[il][iea]->GetTitle(), dedxmean, minbin, maxbin));
162 }
163
164 //Expending constants
165 std::vector<double>layerconst;
166 layerconst.reserve(m_eaBin);
167
168 for (int iea = 0; iea < m_eaBin; iea++) {
169 int jea = iea;
170 if (isVarBins) jea = m_binIndex[il].at(iea);
171 layerconst.push_back(tempconst.at(jea));
172 }
173
174 // plot the rel constants var/sym bins
175 if (isMakePlots) plotRelConst(tempconst, layerconst, il);
176 m_onedcors.push_back(layerconst);
177
178 layerconst.clear();
179 tempconst.clear();
180 }
181
182 //Saving final constants
184
185 if (isMakePlots) {
186
187 //1. dE/dx dist. for entrance angle bins
188 plotdedxHist(hdedxhit);
189
190 //3. Inner and Outer layer dE/dx distributions
191 plotLayerDist(hdedxlay);
192
193 //4. entrance angle distribution sym/var bins
194 plotQaPars(hentalay, hptcosth);
195
196 //6. draw the final constants
198
199 //7. plot statistics related plots here
201 }
202
203 for (int il = 0; il < 2; il++) {
204 delete hentalay[il];
205 delete hdedxlay[il];
206 for (int iea = 0; iea < m_eaBinLocal[il]; iea++)
207 delete hdedxhit[il][iea];
208 }
209
210 delete hptcosth;
211 return c_OK;
212}
std::string m_label[2]
add inner/outer layer label
std::array< std::vector< int >, 2 > m_binIndex
symm/Var bin numebrs
void getTruncatedBins(TH1D *hist, int &binlow, int &binhigh)
function to get bins of trunction from histogram
void CreateBinMapping()
class function to create vectors for bin mappping (Var->symm)
void getExpRunInfo()
function to get extract calibration run/exp
DBObjPtr< CDCDedx1DCell > m_DBOneDCell
One cell correction DB object.
double getTruncationMean(TH1D *hist, int binlow, int binhigh)
function to get truncated mean
void plotConstants()
function to draw the old/new final constants
void plotdedxHist(std::vector< TH1D * > hdedxhit[2])
function to draw the dE/dx histrogram in enta bins
void defineHisto(std::vector< TH1D * > hdedxhit[2], TH1D *hdedxlay[2], TH1D *hentalay[2])
function to define histograms
double m_eaBW
binwdith of enta angle bin
void plotEventStats()
function to draw the stats plots
int rotationalBin(int nbin, int ibin)
class funtion to set rotation symmetry
void plotQaPars(TH1D *hentalay[2], TH2D *hptcosth)
funtion to draw pt vs costh and entrance angle distribution for Inner/Outer layer
void createPayload()
funtion to generate final constants
void plotRelConst(std::vector< double >tempconst, std::vector< double >layerconst, int il)
function to draw symm/Var layer constant
std::vector< std::vector< double > > m_onedcors
final vectors of calibration
void plotLayerDist(TH1D *hdedxL[2])
funtion to draw dedx dist.

◆ checkPyExpRun()

bool checkPyExpRun ( PyObject *  pyObj)
inherited

Checks that a PyObject can be successfully converted to an ExpRun type.

Checks if the PyObject can be converted to ExpRun.

Definition at line 28 of file CalibrationAlgorithm.cc.

29{
30 // Is it a sequence?
31 if (PySequence_Check(pyObj)) {
32 Py_ssize_t nObj = PySequence_Length(pyObj);
33 // Does it have 2 objects in it?
34 if (nObj != 2) {
35 B2DEBUG(29, "ExpRun was a Python sequence which didn't have exactly 2 entries!");
36 return false;
37 }
38 PyObject* item1, *item2;
39 item1 = PySequence_GetItem(pyObj, 0);
40 item2 = PySequence_GetItem(pyObj, 1);
41 // Did the GetItem work?
42 if ((item1 == NULL) || (item2 == NULL)) {
43 B2DEBUG(29, "A PyObject pointer was NULL in the sequence");
44 return false;
45 }
46 // Are they longs?
47 if (PyLong_Check(item1) && PyLong_Check(item2)) {
48 long value1, value2;
49 value1 = PyLong_AsLong(item1);
50 value2 = PyLong_AsLong(item2);
51 if (((value1 == -1) || (value2 == -1)) && PyErr_Occurred()) {
52 B2DEBUG(29, "An error occurred while converting the PyLong to long");
53 return false;
54 }
55 } else {
56 B2DEBUG(29, "One or more of the PyObjects in the ExpRun wasn't a long");
57 return false;
58 }
59 // Make sure to kill off the reference GetItem gave us responsibility for
60 Py_DECREF(item1);
61 Py_DECREF(item2);
62 } else {
63 B2DEBUG(29, "ExpRun was not a Python sequence.");
64 return false;
65 }
66 return true;
67}

◆ clearCalibrationData()

void clearCalibrationData ( )
inlineprotectedinherited

Clear calibration data.

Definition at line 324 of file CalibrationAlgorithm.h.

void clearCalibrationData()
Clear calibration data.
ExecutionData m_data
Data specific to a SINGLE execution of the algorithm. Gets reset at the beginning of execution.

◆ commit() [1/2]

bool commit ( )
inherited

Submit constants from last calibration into database.

Definition at line 302 of file CalibrationAlgorithm.cc.

303{
304 if (getPayloads().empty())
305 return false;
306 list<Database::DBImportQuery> payloads = getPayloads();
307 B2INFO("Committing " << payloads.size() << " payloads to database.");
308 return Database::Instance().storeData(payloads);
309}
std::list< Database::DBImportQuery > & getPayloads()
Get constants (in TObjects) for database update from last execution.
static Database & Instance()
Instance of a singleton Database.
Definition: Database.cc:42
bool storeData(const std::string &name, TObject *object, const IntervalOfValidity &iov)
Store an object in the database.
Definition: Database.cc:141

◆ commit() [2/2]

bool commit ( std::list< Database::DBImportQuery payloads)
inherited

Submit constants from a (potentially previous) set of payloads.

Definition at line 311 of file CalibrationAlgorithm.cc.

312{
313 if (payloads.empty())
314 return false;
315 return Database::Instance().storeData(payloads);
316}

◆ convertPyExpRun()

ExpRun convertPyExpRun ( PyObject *  pyObj)
inherited

Performs the conversion of PyObject to ExpRun.

Converts the PyObject to an ExpRun. We've preoviously checked the object so this assumes a lot about the PyObject.

Definition at line 70 of file CalibrationAlgorithm.cc.

71{
72 ExpRun expRun;
73 PyObject* itemExp, *itemRun;
74 itemExp = PySequence_GetItem(pyObj, 0);
75 itemRun = PySequence_GetItem(pyObj, 1);
76 expRun.first = PyLong_AsLong(itemExp);
77 Py_DECREF(itemExp);
78 expRun.second = PyLong_AsLong(itemRun);
79 Py_DECREF(itemRun);
80 return expRun;
81}
Struct containing exp number and run number.
Definition: Splitter.h:51

◆ CreateBinMapping()

void CreateBinMapping ( )

class function to create vectors for bin mappping (Var->symm)

Definition at line 240 of file CDCDedx1DCellAlgorithm.cc.

241{
242
243 std::map<int, std::vector<double>> bounds;
244 std::map<int, std::vector<int>> steps;
245
246 const std::array<int, 2> nDev{8, 4};
247 bounds[0] = {0, 108, 123, 133, 158, 183, 193, 208, 316}; //il boundries
248 steps[0] = {9, 3, 2, 1, 1, 2, 3, 9}; //il steps
249 bounds[1] = {0, 38, 158, 278, 316}; //OL boundries
250 steps[1] = {2, 1, 1, 2}; //OL steps
251
252 for (int il = 0; il < 2; il++) {
253
254 for (int ibin = 0; ibin <= nDev[il]; ibin++) bounds[il][ibin] = bounds[il][ibin] * m_binSplit;
255
256 int ieaprime = -1, temp = -99, ibin = 0;
257
258 double pastbin = m_eaMin;
259 m_binValue[il].push_back(pastbin);
260
261 for (int iea = 0; iea < m_eaBin; iea++) {
262
263 if (isVarBins) {
264 if (iea % int(bounds[il][ibin + 1]) == 0 && iea > 0) ibin++;
265 int diff = iea - int(bounds[il][ibin]);
266 if (diff % steps[il][ibin] == 0) ieaprime++;
267 } else ieaprime = iea;
268
269 m_binIndex[il].push_back(ieaprime);
270
271 if (ieaprime != temp) {
272 double binwidth = m_eaBW;
273 if (isVarBins) binwidth = m_eaBW * steps[il][ibin];
274 double binvalue = pastbin + binwidth;
275 pastbin = binvalue;
276 if (abs(binvalue) < 1e-5)binvalue = 0;
277 m_binValue[il].push_back(binvalue);
278 }
279 temp = ieaprime;
280 }
281 m_eaBinLocal.push_back(int(m_binValue[il].size()) - 1) ;
282 }
283 if (isMakePlots) plotMergeFactor(bounds, nDev, steps);
284}
void plotMergeFactor(std::map< int, std::vector< double > > bounds, const std::array< int, 2 > nDev, std::map< int, std::vector< int > > steps)
funtion to plot merging factor
std::array< std::vector< double >, 2 > m_binValue
etna Var bin values

◆ createPayload()

void createPayload ( )

funtion to generate final constants

Definition at line 368 of file CDCDedx1DCellAlgorithm.cc.

369{
370
371 B2INFO("dE/dx one cell calibration: Generating payloads");
372
373 for (unsigned int il = 0; il < 2; il++) {
374 if (isMerge) {
375 unsigned int nbins = m_DBOneDCell->getNBins(il);
376
377 if (int(nbins) != m_eaBin)
378 B2ERROR("merging failed because of unmatch bins (old " << m_eaBin << " new " << nbins << ")");
379
380 for (unsigned int iea = 0; iea < nbins; iea++) {
381 double prev = m_DBOneDCell->getMean(8 * il + 1, iea);
382 m_onedcors[il][iea] *= prev;
383 // m_onedcors[il][iea] /= 0.98;
384 }
385 }
386
387 if (m_chargeType > 0)
388 for (int ie = 0; ie < m_eaBin / 2; ie++) m_onedcors[il][ie] *= m_adjustFac;
389 if (m_chargeType < 0)
390 for (int ie = m_eaBin / 2; ie < m_eaBin; ie++) m_onedcors[il][ie] *= m_adjustFac;
391
392 }
393 //Saving constants
394 B2INFO("dE/dx Calibration done for CDCDedx1DCell");
395 CDCDedx1DCell* gain = new CDCDedx1DCell(0, m_onedcors);
396 saveCalibration(gain, "CDCDedx1DCell");
397}
dE/dx wire gain calibration constants
Definition: CDCDedx1DCell.h:27
void saveCalibration(TClonesArray *data, const std::string &name)
Store DBArray payload with given name with default IOV.

◆ defineHisto()

void defineHisto ( std::vector< TH1D * >  hdedxhit[2],
TH1D *  hdedxlay[2],
TH1D *  hentalay[2] 
)

function to define histograms

Definition at line 287 of file CDCDedx1DCellAlgorithm.cc.

288{
289 for (int il = 0; il < 2; il++) {
290
291 std::string title = Form("dedxhit dist (%s): %s ; dedxhit;entries", m_label[il].data(), m_runExp.data());
292 hdedxlay[il] = new TH1D(Form("hdedxlay%s", m_label[il].data()), "", m_dedxBin, m_dedxMin, m_dedxMax);
293 hdedxlay[il]->SetTitle(Form("%s", title.data()));
294
295 Double_t* nvarBins;
296 nvarBins = &m_binValue[il][0];
297
298 if (isVarBins) title = Form("entaRS dist (variable bins): %s: (%s); entaRS (#alpha);entries", m_label[il].data(), m_runExp.data());
299 else title = Form("entaRS dist (sym. bins): %s: (%s); entaRS (#alpha);entries", m_label[il].data(), m_runExp.data());
300
301 hentalay[il] = new TH1D(Form("hentalay%s", m_label[il].data()), "", m_eaBinLocal[il], nvarBins);
302 hentalay[il]->SetTitle(Form("%s", title.data()));
303
304 for (int iea = 0; iea < m_eaBinLocal[il]; iea++) {
305
306 double min = m_binValue[il].at(iea);
307 double max = m_binValue[il].at(iea + 1);
308 double width = max - min;
309
310 if (isPrintLog) B2INFO("bin: " << iea << " ], min:" << min << " , max: " << max << " , width: " << width);
311
312 title = Form("%s: entaRS = (%0.03f to %0.03f)", m_label[il].data(), min, max);
313 hdedxhit[il].push_back(new TH1D(Form("hdedxhit_%s_bin%d", m_label[il].data(), iea), "", m_dedxBin, m_dedxMin, m_dedxMax));
314 hdedxhit[il][iea]->SetTitle(Form("%s", title.data()));
315 }
316 }
317}
std::string m_runExp
add suffix to all plot name

◆ dumpOutputJson()

const std::string dumpOutputJson ( ) const
inlineinherited

Dump the JSON string of the output JSON object.

Definition at line 223 of file CalibrationAlgorithm.h.

223{return m_jsonExecutionOutput.dump();}
nlohmann::json m_jsonExecutionOutput
Optional output JSON object that can be set during the execution by the underlying algorithm code.

◆ enableExtraPlots()

void enableExtraPlots ( bool  value = false)
inline

function to set flag active for plotting

Definition at line 95 of file CDCDedx1DCellAlgorithm.h.

95{isMakePlots = value;}

◆ execute() [1/2]

CalibrationAlgorithm::EResult execute ( PyObject *  runs,
int  iteration = 0,
IntervalOfValidity  iov = IntervalOfValidity() 
)
inherited

Runs calibration over Python list of runs. Converts to C++ and then calls the other execute() function.

Definition at line 83 of file CalibrationAlgorithm.cc.

84{
85 B2DEBUG(29, "Running execute() using Python Object as input argument");
86 // Reset the execution specific data in case the algorithm was previously called
87 m_data.reset();
88 m_data.setIteration(iteration);
89 vector<ExpRun> vecRuns;
90 // Is it a list?
91 if (PySequence_Check(runs)) {
92 boost::python::handle<> handle(boost::python::borrowed(runs));
93 boost::python::list listRuns(handle);
94
95 int nList = boost::python::len(listRuns);
96 for (int iList = 0; iList < nList; ++iList) {
97 boost::python::object pyExpRun(listRuns[iList]);
98 if (!checkPyExpRun(pyExpRun.ptr())) {
99 B2ERROR("Received Python ExpRuns couldn't be converted to C++");
101 return c_Failure;
102 } else {
103 vecRuns.push_back(convertPyExpRun(pyExpRun.ptr()));
104 }
105 }
106 } else {
107 B2ERROR("Tried to set the input runs but we didn't receive a Python sequence object (list,tuple).");
109 return c_Failure;
110 }
111 return execute(vecRuns, iteration, iov);
112}
void setResult(EResult result)
Setter for current iteration.
void setIteration(int iteration)
Setter for current iteration.
void reset()
Resets this class back to what is needed at the beginning of an execution.
bool checkPyExpRun(PyObject *pyObj)
Checks that a PyObject can be successfully converted to an ExpRun type.
EResult execute(std::vector< Calibration::ExpRun > runs={}, int iteration=0, IntervalOfValidity iov=IntervalOfValidity())
Runs calibration over vector of runs for a given iteration.
Calibration::ExpRun convertPyExpRun(PyObject *pyObj)
Performs the conversion of PyObject to ExpRun.

◆ execute() [2/2]

CalibrationAlgorithm::EResult execute ( std::vector< Calibration::ExpRun >  runs = {},
int  iteration = 0,
IntervalOfValidity  iov = IntervalOfValidity() 
)
inherited

Runs calibration over vector of runs for a given iteration.

You can also specify the IoV to save the database payload as. By default the Algorithm will create an IoV from your requested ExpRuns, or from the overall ExpRuns of the input data if you haven't specified ExpRuns in this function.

No checks are performed to make sure that a IoV you specify matches the data you ran over, it simply labels the IoV to commit to the database later.

Definition at line 114 of file CalibrationAlgorithm.cc.

115{
116 // Check if we are calling this function directly and need to reset, or through Python where it was already done.
117 if (m_data.getResult() != c_Undefined) {
118 m_data.reset();
119 m_data.setIteration(iteration);
120 }
121
122 if (m_inputFileNames.empty()) {
123 B2ERROR("There aren't any input files set. Please use CalibrationAlgorithm::setInputFiles()");
125 return c_Failure;
126 }
127
128 // Did we receive runs to execute over explicitly?
129 if (!(runs.empty())) {
130 for (auto expRun : runs) {
131 B2DEBUG(29, "ExpRun requested = (" << expRun.first << ", " << expRun.second << ")");
132 }
133 // We've asked explicitly for certain runs, but we should check if the data granularity is 'run'
134 if (strcmp(getGranularity().c_str(), "all") == 0) {
135 B2ERROR(("The data is collected with granularity=all (exp=-1,run=-1), but you seem to request calibration for specific runs."
136 " We'll continue but using ALL the input data given instead of the specific runs requested."));
137 }
138 } else {
139 // If no runs are provided, infer the runs from all collected data
140 runs = getRunListFromAllData();
141 // Let's check that we have some now
142 if (runs.empty()) {
143 B2ERROR("No collected data in input files.");
145 return c_Failure;
146 }
147 for (auto expRun : runs) {
148 B2DEBUG(29, "ExpRun requested = (" << expRun.first << ", " << expRun.second << ")");
149 }
150 }
151
153 if (iov.empty()) {
154 // If no user specified IoV we use the IoV from the executed run list
155 iov = IntervalOfValidity(runs[0].first, runs[0].second, runs[runs.size() - 1].first, runs[runs.size() - 1].second);
156 }
158 // After here, the getObject<...>(...) helpers start to work
159
161 m_data.setResult(result);
162 return result;
163}
void setRequestedIov(const IntervalOfValidity &iov=IntervalOfValidity(0, 0, -1, -1))
Sets the requested IoV for this execution, based on the.
void setRequestedRuns(const std::vector< Calibration::ExpRun > &requestedRuns)
Sets the vector of ExpRuns.
EResult getResult() const
Getter for current result.
std::vector< Calibration::ExpRun > getRunListFromAllData() const
Get the complete list of runs from inspection of collected data.
std::vector< std::string > m_inputFileNames
List of input files to the Algorithm, will initially be user defined but then gets the wildcards expa...
EResult
The result of calibration.
virtual EResult calibrate()=0
Run algo on data - pure virtual: needs to be implemented.
std::string getGranularity() const
Get the granularity of collected data.
A class that describes the interval of experiments/runs for which an object in the database is valid.

◆ fillRunToInputFilesMap()

void fillRunToInputFilesMap ( )
inherited

Fill the mapping of ExpRun -> Files.

Definition at line 330 of file CalibrationAlgorithm.cc.

331{
332 m_runsToInputFiles.clear();
333 // Save TDirectory to change back at the end
334 TDirectory* dir = gDirectory;
335 RunRange* runRange;
336 // Construct the TDirectory name where we expect our objects to be
337 string runRangeObjName(getPrefix() + "/" + RUN_RANGE_OBJ_NAME);
338 for (const auto& fileName : m_inputFileNames) {
339 //Open TFile to get the objects
340 unique_ptr<TFile> f;
341 f.reset(TFile::Open(fileName.c_str(), "READ"));
342 runRange = dynamic_cast<RunRange*>(f->Get(runRangeObjName.c_str()));
343 if (runRange) {
344 // Insert or extend the run -> file mapping for this ExpRun
345 auto expRuns = runRange->getExpRunSet();
346 for (const auto& expRun : expRuns) {
347 auto runFiles = m_runsToInputFiles.find(expRun);
348 if (runFiles != m_runsToInputFiles.end()) {
349 (runFiles->second).push_back(fileName);
350 } else {
351 m_runsToInputFiles.insert(std::make_pair(expRun, std::vector<std::string> {fileName}));
352 }
353 }
354 } else {
355 B2WARNING("Missing a RunRange object for file: " << fileName);
356 }
357 }
358 dir->cd();
359}
std::string getPrefix() const
Get the prefix used for getting calibration data.
std::map< Calibration::ExpRun, std::vector< std::string > > m_runsToInputFiles
Map of Runs to input files. Gets filled when you call getRunRangeFromAllData, gets cleared when setti...
Mergeable object holding (unique) set of (exp,run) pairs.
Definition: RunRange.h:25
const std::set< Calibration::ExpRun > & getExpRunSet()
Get access to the stored set.
Definition: RunRange.h:64

◆ findPayloadBoundaries()

const std::vector< ExpRun > findPayloadBoundaries ( std::vector< Calibration::ExpRun >  runs,
int  iteration = 0 
)
inherited

Used to discover the ExpRun boundaries that you want the Python CAF to execute on. This is optional and only used in some.

Definition at line 520 of file CalibrationAlgorithm.cc.

521{
522 m_boundaries.clear();
523 if (m_inputFileNames.empty()) {
524 B2ERROR("There aren't any input files set. Please use CalibrationAlgorithm::setInputFiles()");
525 return m_boundaries;
526 }
527 // Reset the internal execution data just in case something is hanging around
528 m_data.reset();
529 if (runs.empty()) {
530 // Want to loop over all runs we could possibly know about
531 runs = getRunListFromAllData();
532 }
533 // Let's check that we have some now
534 if (runs.empty()) {
535 B2ERROR("No collected data in input files.");
536 return m_boundaries;
537 }
538 // In order to find run boundaries we must have collected with data granularity == 'run'
539 if (strcmp(getGranularity().c_str(), "all") == 0) {
540 B2ERROR("The data is collected with granularity='all' (exp=-1,run=-1), and we can't use that to find run boundaries.");
541 return m_boundaries;
542 }
543 m_data.setIteration(iteration);
544 // User defined setup function
545 boundaryFindingSetup(runs, iteration);
546 std::vector<ExpRun> runList;
547 // Loop over run list and call derived class "isBoundaryRequired" member function
548 for (auto currentRun : runs) {
549 runList.push_back(currentRun);
550 m_data.setRequestedRuns(runList);
551 // After here, the getObject<...>(...) helpers start to work
552 if (isBoundaryRequired(currentRun)) {
553 m_boundaries.push_back(currentRun);
554 }
555 // Only want run-by-run
556 runList.clear();
557 // Don't want memory hanging around
559 }
560 m_data.reset();
562 return m_boundaries;
563}
std::vector< Calibration::ExpRun > m_boundaries
When using the boundaries functionality from isBoundaryRequired, this is used to store the boundaries...
virtual void boundaryFindingTearDown()
Put your algorithm back into a state ready for normal execution if you need to.
virtual void boundaryFindingSetup(std::vector< Calibration::ExpRun >, int)
If you need to make some changes to your algorithm class before 'findPayloadBoundaries' is run,...
virtual bool isBoundaryRequired(const Calibration::ExpRun &)
Given the current collector data, make a decision about whether or not this run should be the start o...

◆ getAllGranularityExpRun()

Calibration::ExpRun getAllGranularityExpRun ( ) const
inlineprotectedinherited

Returns the Exp,Run pair that means 'Everything'. Currently unused.

Definition at line 327 of file CalibrationAlgorithm.h.

327{return m_allExpRun;}
static const Calibration::ExpRun m_allExpRun
allExpRun

◆ getCollectorName()

std::string getCollectorName ( ) const
inlineinherited

Alias for prefix.

For convenience and less writing, we say developers to set this to default collector module name in constructor of base class. One can however use the dublets of collector+algorithm multiple times with different settings. To bind these together correctly, the prefix has to be set the same for algo and collector. So we call the setter setPrefix rather than setModuleName or whatever. This getter will work out of the box for default cases -> return the name of module you have to add to your path to collect data for this algorihtm.

Definition at line 164 of file CalibrationAlgorithm.h.

164{return getPrefix();}

◆ getDescription()

const std::string & getDescription ( ) const
inlineinherited

Get the description of the algoithm (set by developers in constructor)

Definition at line 216 of file CalibrationAlgorithm.h.

216{return m_description;}
std::string m_description
Description of the algorithm.

◆ getExpRunInfo()

void getExpRunInfo ( )

function to get extract calibration run/exp

Definition at line 215 of file CDCDedx1DCellAlgorithm.cc.

216{
217
218 int cruns = 0;
219 for (auto expRun : getRunList()) {
220 if (cruns == 0) B2INFO("CDCDedxBadWires: start exp " << expRun.first << " and run " << expRun.second << "");
221 cruns++;
222 }
223
224 const auto erStart = getRunList()[0];
225 int estart = erStart.first;
226 int rstart = erStart.second;
227
228 const auto erEnd = getRunList()[cruns - 1];
229 int eend = erEnd.first;
230 int rend = erEnd.second;
231
232 updateDBObjPtrs(1, rstart, estart);
233
234 m_runExp = Form("Range (%d:%d,%d:%d)", estart, rstart, eend, rend);
235 if (m_suffix.length() > 0) m_suffix = Form("%s_e%d_r%dr%d", m_suffix.data(), estart, rstart, rend);
236 else m_suffix = Form("e%d_r%dr%d", estart, rstart, rend);
237}
void updateDBObjPtrs(const unsigned int event, const int run, const int experiment)
Updates any DBObjPtrs by calling update(event) for DBStore.
const std::vector< Calibration::ExpRun > & getRunList() const
Get the list of runs for which calibration is called.

◆ getExpRunString()

string getExpRunString ( Calibration::ExpRun &  expRun) const
privateinherited

Gets the "exp.run" string repr. of (exp,run)

Definition at line 254 of file CalibrationAlgorithm.cc.

255{
256 string expRunString;
257 expRunString += to_string(expRun.first);
258 expRunString += ".";
259 expRunString += to_string(expRun.second);
260 return expRunString;
261}

◆ getFullObjectPath()

string getFullObjectPath ( const std::string &  name,
Calibration::ExpRun  expRun 
) const
privateinherited

constructs the full TDirectory + Key name of an object in a TFile based on its name and exprun

Definition at line 263 of file CalibrationAlgorithm.cc.

264{
265 string dirName = getPrefix() + "/" + name;
266 string objName = name + "_" + getExpRunString(expRun);
267 return dirName + "/" + objName;
268}
std::string getExpRunString(Calibration::ExpRun &expRun) const
Gets the "exp.run" string repr. of (exp,run)

◆ getGranularity()

std::string getGranularity ( ) const
inlineinherited

Get the granularity of collected data.

Definition at line 188 of file CalibrationAlgorithm.h.

188{return m_granularityOfData;};
std::string m_granularityOfData
Granularity of input data. This only changes when the input files change so it isn't specific to an e...

◆ getGranularityFromData()

string getGranularityFromData ( ) const
protectedinherited

Get the granularity of collected data.

Definition at line 383 of file CalibrationAlgorithm.cc.

384{
385 // Save TDirectory to change back at the end
386 TDirectory* dir = gDirectory;
387 RunRange* runRange;
388 string runRangeObjName(getPrefix() + "/" + RUN_RANGE_OBJ_NAME);
389 // We only check the first file
390 string fileName = m_inputFileNames[0];
391 unique_ptr<TFile> f;
392 f.reset(TFile::Open(fileName.c_str(), "READ"));
393 runRange = dynamic_cast<RunRange*>(f->Get(runRangeObjName.c_str()));
394 if (!runRange) {
395 B2FATAL("The input file " << fileName << " does not contain a RunRange object at "
396 << runRangeObjName << ". Please set your input files to exclude it.");
397 return "";
398 }
399 string granularity = runRange->getGranularity();
400 dir->cd();
401 return granularity;
402}
std::string getGranularity() const
Gets the m_granularity.
Definition: RunRange.h:110

◆ getInputFileNames()

PyObject * getInputFileNames ( )
inherited

Get the input file names used for this algorithm and pass them out as a Python list of unicode strings.

Definition at line 245 of file CalibrationAlgorithm.cc.

246{
247 PyObject* objInputFileNames = PyList_New(m_inputFileNames.size());
248 for (size_t i = 0; i < m_inputFileNames.size(); ++i) {
249 PyList_SetItem(objInputFileNames, i, Py_BuildValue("s", m_inputFileNames[i].c_str()));
250 }
251 return objInputFileNames;
252}

◆ getInputJsonObject()

const nlohmann::json & getInputJsonObject ( ) const
inlineprotectedinherited

Get the entire top level JSON object. We explicitly say this must be of object type so that we might pick.

Definition at line 357 of file CalibrationAlgorithm.h.

357{return m_jsonExecutionInput;}
nlohmann::json m_jsonExecutionInput
Optional input JSON object used to make decisions about how to execute the algorithm code.

◆ getInputJsonValue()

const T getInputJsonValue ( const std::string &  key) const
inlineprotectedinherited

Get an input JSON value using a key. The normal exceptions are raised when the key doesn't exist.

Definition at line 350 of file CalibrationAlgorithm.h.

351 {
352 return m_jsonExecutionInput.at(key);
353 }

◆ getIovFromAllData()

IntervalOfValidity getIovFromAllData ( ) const
inherited

Get the complete IoV from inspection of collected data.

Definition at line 325 of file CalibrationAlgorithm.cc.

326{
328}
RunRange getRunRangeFromAllData() const
Get the complete RunRange from inspection of collected data.
IntervalOfValidity getIntervalOfValidity()
Make IntervalOfValidity from the set, spanning all runs. Works because sets are sorted by default.
Definition: RunRange.h:70

◆ getIteration()

int getIteration ( ) const
inlineprotectedinherited

Get current iteration.

Definition at line 269 of file CalibrationAlgorithm.h.

269{ return m_data.getIteration(); }
int getIteration() const
Getter for current iteration.

◆ getObjectPtr()

std::shared_ptr< T > getObjectPtr ( std::string  name)
inlineprotectedinherited

Get calibration data object (for all runs the calibration is requested for) This function will only work during or after execute() has been called once.

Definition at line 285 of file CalibrationAlgorithm.h.

286 {
287 if (m_runsToInputFiles.size() == 0)
289 return getObjectPtr<T>(name, m_data.getRequestedRuns());
290 }
const std::vector< Calibration::ExpRun > & getRequestedRuns() const
Returns the vector of ExpRuns.
void fillRunToInputFilesMap()
Fill the mapping of ExpRun -> Files.

◆ getOutputJsonValue()

const T getOutputJsonValue ( const std::string &  key) const
inlineprotectedinherited

Get a value using a key from the JSON output object, not sure why you would want to do this.

Definition at line 342 of file CalibrationAlgorithm.h.

343 {
344 return m_jsonExecutionOutput.at(key);
345 }

◆ getPayloads()

std::list< Database::DBImportQuery > & getPayloads ( )
inlineinherited

Get constants (in TObjects) for database update from last execution.

Definition at line 204 of file CalibrationAlgorithm.h.

204{return m_data.getPayloads();}
std::list< Database::DBImportQuery > & getPayloads()
Get constants (in TObjects) for database update from last calibration.

◆ getPayloadValues()

std::list< Database::DBImportQuery > getPayloadValues ( )
inlineinherited

Get constants (in TObjects) for database update from last execution but passed by VALUE.

Definition at line 207 of file CalibrationAlgorithm.h.

207{return m_data.getPayloadValues();}
std::list< Database::DBImportQuery > getPayloadValues()
Get constants (in TObjects) for database update from last calibration but passed by VALUE.

◆ getPrefix()

std::string getPrefix ( ) const
inlineinherited

Get the prefix used for getting calibration data.

Definition at line 146 of file CalibrationAlgorithm.h.

146{return m_prefix;}
std::string m_prefix
The name of the TDirectory the collector objects are contained within.

◆ getRunList()

const std::vector< Calibration::ExpRun > & getRunList ( ) const
inlineprotectedinherited

Get the list of runs for which calibration is called.

Definition at line 266 of file CalibrationAlgorithm.h.

266{return m_data.getRequestedRuns();}

◆ getRunListFromAllData()

vector< ExpRun > getRunListFromAllData ( ) const
inherited

Get the complete list of runs from inspection of collected data.

Definition at line 318 of file CalibrationAlgorithm.cc.

319{
320 RunRange runRange = getRunRangeFromAllData();
321 set<ExpRun> expRunSet = runRange.getExpRunSet();
322 return vector<ExpRun>(expRunSet.begin(), expRunSet.end());
323}

◆ getRunRangeFromAllData()

RunRange getRunRangeFromAllData ( ) const
inherited

Get the complete RunRange from inspection of collected data.

Definition at line 361 of file CalibrationAlgorithm.cc.

362{
363 // Save TDirectory to change back at the end
364 TDirectory* dir = gDirectory;
365 RunRange runRange;
366 // Construct the TDirectory name where we expect our objects to be
367 string runRangeObjName(getPrefix() + "/" + RUN_RANGE_OBJ_NAME);
368 for (const auto& fileName : m_inputFileNames) {
369 //Open TFile to get the objects
370 unique_ptr<TFile> f;
371 f.reset(TFile::Open(fileName.c_str(), "READ"));
372 RunRange* runRangeOther = dynamic_cast<RunRange*>(f->Get(runRangeObjName.c_str()));
373 if (runRangeOther) {
374 runRange.merge(runRangeOther);
375 } else {
376 B2WARNING("Missing a RunRange object for file: " << fileName);
377 }
378 }
379 dir->cd();
380 return runRange;
381}
virtual void merge(const RunRange *other)
Implementation of merging - other is added to the set (union)
Definition: RunRange.h:52

◆ getTruncatedBins()

void getTruncatedBins ( TH1D *  hist,
int &  binlow,
int &  binhigh 
)

function to get bins of trunction from histogram

Definition at line 320 of file CDCDedx1DCellAlgorithm.cc.

321{
322
323 //calculating truncation average
324 double sum = hist->Integral();
325 if (sum <= 0 || hist->GetNbinsX() <= 0) {
326 binlow = 1; binhigh = 1;
327 return ;
328 }
329
330 binlow = 1.0; binhigh = 1.0;
331 double sumPer5 = 0.0, sumPer75 = 0.0;
332 for (int ibin = 1; ibin <= hist->GetNbinsX(); ibin++) {
333 double bcdedx = hist->GetBinContent(ibin);
334 if (sumPer5 <= m_truncMin * sum) {
335 sumPer5 += bcdedx;
336 binlow = ibin;
337 }
338 if (sumPer75 <= m_truncMax * sum) {
339 sumPer75 += bcdedx;
340 binhigh = ibin;
341 }
342 }
343 return;
344}

◆ getTruncationMean()

double getTruncationMean ( TH1D *  hist,
int  binlow,
int  binhigh 
)

function to get truncated mean

Definition at line 347 of file CDCDedx1DCellAlgorithm.cc.

348{
349
350 //calculating truncation average
351 if (hist->Integral() < 100) return 1.0;
352
353 if (binlow <= 0 || binhigh > hist->GetNbinsX())return 1.0;
354
355 double binweights = 0., sumofbc = 0.;
356 for (int ibin = binlow; ibin <= binhigh; ibin++) {
357 double bcdedx = hist->GetBinContent(ibin);
358 if (bcdedx > 0) {
359 binweights += (bcdedx * hist->GetBinCenter(ibin));
360 sumofbc += bcdedx;
361 }
362 }
363 if (sumofbc > 0) return binweights / sumofbc;
364 else return 1.0;
365}

◆ getVecInputFileNames()

std::vector< std::string > getVecInputFileNames ( ) const
inlineprotectedinherited

Get the input file names used for this algorithm as a STL vector.

Definition at line 275 of file CalibrationAlgorithm.h.

275{return m_inputFileNames;}

◆ inputJsonKeyExists()

bool inputJsonKeyExists ( const std::string &  key) const
inlineprotectedinherited

Test for a key in the input JSON object.

Definition at line 360 of file CalibrationAlgorithm.h.

360{return m_jsonExecutionInput.count(key);}

◆ isBoundaryRequired()

virtual bool isBoundaryRequired ( const Calibration::ExpRun &  )
inlineprotectedvirtualinherited

Given the current collector data, make a decision about whether or not this run should be the start of a payload boundary.

Reimplemented in TestBoundarySettingAlgorithm, PXDAnalyticGainCalibrationAlgorithm, PXDValidationAlgorithm, TestCalibrationAlgorithm, SVD3SampleCoGTimeCalibrationAlgorithm, SVD3SampleELSTimeCalibrationAlgorithm, and SVDCoGTimeCalibrationAlgorithm.

Definition at line 243 of file CalibrationAlgorithm.h.

244 {
245 B2ERROR("You didn't implement a isBoundaryRequired() member function in your CalibrationAlgorithm but you are calling it!");
246 return false;
247 }

◆ loadInputJson()

bool loadInputJson ( const std::string &  jsonString)
inherited

Load the m_inputJson variable from a string (useful from Python interface). The rturn bool indicates success or failure.

Definition at line 502 of file CalibrationAlgorithm.cc.

503{
504 try {
505 auto jsonInput = nlohmann::json::parse(jsonString);
506 // Input string has an object (dict) as the top level object?
507 if (jsonInput.is_object()) {
508 m_jsonExecutionInput = jsonInput;
509 return true;
510 } else {
511 B2ERROR("JSON input string isn't an object type i.e. not a '{}' at the top level.");
512 return false;
513 }
514 } catch (nlohmann::json::parse_error&) {
515 B2ERROR("Parsing of JSON input string failed");
516 return false;
517 }
518}

◆ plotConstants()

void plotConstants ( )

function to draw the old/new final constants

Definition at line 573 of file CDCDedx1DCellAlgorithm.cc.

574{
575
576 //Draw New/Old final constants
577 TH1D* hnewconst[2], *holdconst[2];
578 double min[2], max[2];
579
580 for (unsigned int il = 0; il < 2; il++) {
581 unsigned int nbins = m_DBOneDCell->getNBins(il);
582
583 std::string title = Form("final calibration const dist (%s): %s; entaRS (#alpha); entries", m_label[il].data(), m_runExp.data());
584 hnewconst[il] = new TH1D(Form("hnewconst_%s", m_label[il].data()), "", m_eaBin, m_eaMin, m_eaMax);
585 hnewconst[il]->SetTitle(Form("%s", title.data()));
586
587 title = Form("old calibration const dist (%s): %s; entaRS (#alpha); entries", m_label[il].data(), m_runExp.data());
588 holdconst[il] = new TH1D(Form("holdconst_%s", m_label[il].data()), "", m_eaBin, m_eaMin, m_eaMax);
589 holdconst[il]->SetTitle(Form("%s", title.data()));
590
591 for (unsigned int iea = 0; iea < nbins; iea++) {
592 double prev = m_DBOneDCell->getMean(8 * il + 1, iea);
593 holdconst[il]->SetBinContent(iea + 1, prev);
594 hnewconst[il]->SetBinContent(iea + 1, m_onedcors[il][iea]);
595 }
596 min[il] = hnewconst[il]->GetMinimum();
597 max[il] = hnewconst[il]->GetMaximum();
598 }
599
600 //Ploting final constants
601 if (max[1] < max[0])max[1] = max[0];
602 if (min[1] > min[0])min[1] = min[0];
603
604 gStyle->SetOptStat("ne");
605 TCanvas cfconst("cfconst", "Final calirbation constants", 800, 400);
606 cfconst.Divide(2, 1);
607
608 for (int il = 0; il < 2; il++) {
609 cfconst.cd(il + 1);
610 hnewconst[il]->GetYaxis()->SetRangeUser(min[1] * 0.95, max[1] * 1.05);
611 hnewconst[il]->SetLineColor(kBlack);
612 hnewconst[il]->Draw("histo");
613 holdconst[il]->SetLineColor(kRed);
614 holdconst[il]->Draw("histo same");
615
616 auto legend = new TLegend(0.4, 0.75, 0.56, 0.85);
617 legend->AddEntry(holdconst[il], "Old", "lep");
618 legend->AddEntry(hnewconst[il], "New", "lep");
619 legend->Draw();
620 }
621
622 cfconst.SaveAs(Form("cdcdedx_1dcell_fconsts%s.pdf", m_suffix.data()));
623 cfconst.SaveAs(Form("cdcdedx_1dcell_fconsts%s.root", m_suffix.data()));
624
625 for (int il = 0; il < 2; il++) {
626 delete hnewconst[il];
627 delete holdconst[il];
628 }
629}

◆ plotdedxHist()

void plotdedxHist ( std::vector< TH1D * >  hdedxhit[2])

function to draw the dE/dx histrogram in enta bins

Definition at line 427 of file CDCDedx1DCellAlgorithm.cc.

428{
429
430 TCanvas ctmp("tmp", "tmp", 1200, 1200);
431 ctmp.Divide(4, 4);
432 std::stringstream psname;
433
434 psname << Form("cdcdedx_1dcell_dedxhit%s.pdf[", m_suffix.data());
435 ctmp.Print(psname.str().c_str());
436 psname.str("");
437 psname << Form("cdcdedx_1dcell_dedxhit%s.pdf", m_suffix.data());
438
439 for (int il = 0; il < 2; il++) {
440
441 for (int jea = 0; jea < m_eaBinLocal[il]; jea++) {
442
443 int minbin = std::stoi(hdedxhit[il][jea]->GetXaxis()->GetTitle());
444 int maxbin = std::stoi(hdedxhit[il][jea]->GetYaxis()->GetTitle());
445
446 ctmp.cd(jea % 16 + 1);
447 hdedxhit[il][jea]->SetFillColor(4 + il);
448
449 hdedxhit[il][jea]->SetTitle(Form("%s;dedxhit;entries", hdedxhit[il][jea]->GetTitle()));
450 hdedxhit[il][jea]->DrawClone("hist");
451 TH1D* htempC = (TH1D*)hdedxhit[il][jea]->Clone(Form("%sc2", hdedxhit[il][jea]->GetName()));
452 htempC->GetXaxis()->SetRange(minbin, maxbin);
453 htempC->SetFillColor(kGray);
454 htempC->DrawClone("same hist");
455
456 if (jea % 16 == 15 || (jea == m_eaBinLocal[il] - 1)) {
457 ctmp.Print(psname.str().c_str());
458 gPad->Clear("D");
459 ctmp.Clear("D");
460 }
461 delete htempC;
462 }
463 }
464 psname.str("");
465 psname << Form("cdcdedx_1dcell_dedxhit%s.pdf]", m_suffix.data());
466 ctmp.Print(psname.str().c_str());
467}

◆ plotEventStats()

void plotEventStats ( )

function to draw the stats plots

Definition at line 632 of file CDCDedx1DCellAlgorithm.cc.

633{
634
635 TCanvas cstats("cstats", "cstats", 1000, 500);
636 cstats.SetBatch(kTRUE);
637 cstats.Divide(2, 1);
638
639 cstats.cd(1);
640 auto hestats = getObjectPtr<TH1I>("hestats");
641 if (hestats) {
642 hestats->SetName(Form("hestats_%s", m_suffix.data()));
643 hestats->SetStats(0);
644 hestats->DrawCopy("");
645 }
646
647 cstats.cd(2);
648 auto htstats = getObjectPtr<TH1I>("htstats");
649 if (htstats) {
650 hestats->SetName(Form("htstats_%s", m_suffix.data()));
651 htstats->DrawCopy("");
652 hestats->SetStats(0);
653 }
654 cstats.Print(Form("cdcdedx_1dcell_stats_%s.pdf", m_suffix.data()));
655}

◆ plotLayerDist()

void plotLayerDist ( TH1D *  hdedxL[2])

funtion to draw dedx dist.

for Inner/outer layer

Definition at line 470 of file CDCDedx1DCellAlgorithm.cc.

471{
472
473 TCanvas cdedxlayer("layerdedxhit", "Inner and Outer Layer dedxhit dist", 900, 400);
474 cdedxlayer.Divide(2, 1);
475
476 for (int il = 0; il < 2; il++) {
477 int minlay = 0, maxlay = 0;
478 if (isFixTrunc) {
479 minlay = std::stoi(hdedxlay[il]->GetXaxis()->GetTitle());
480 maxlay = std::stoi(hdedxlay[il]->GetYaxis()->GetTitle());
481 double lowedge = hdedxlay[il]->GetXaxis()->GetBinLowEdge(minlay);
482 double upedge = hdedxlay[il]->GetXaxis()->GetBinUpEdge(maxlay);
483 hdedxlay[il]->SetTitle(Form("%s, trunc #rightarrow: %0.02f - %0.02f;dedxhit;entries", hdedxlay[il]->GetTitle(), lowedge, upedge));
484 }
485
486 cdedxlayer.cd(il + 1);
487 hdedxlay[il]->SetFillColor(kYellow);
488 hdedxlay[il]->Draw("histo");
489
490 if (isFixTrunc) {
491 TH1D* hdedxlayC = (TH1D*)hdedxlay[il]->Clone(Form("hdedxlayC%d", il));
492 hdedxlayC->GetXaxis()->SetRange(minlay, maxlay);
493 hdedxlayC->SetFillColor(kAzure + 1);
494 hdedxlayC->Draw("same histo");
495 }
496 }
497
498 cdedxlayer.SaveAs(Form("cdcdedx_1dcell_dedxlay%s.pdf", m_suffix.data()));
499 cdedxlayer.SaveAs(Form("cdcdedx_1dcell_dedxlay%s.root", m_suffix.data()));
500}

◆ plotMergeFactor()

void plotMergeFactor ( std::map< int, std::vector< double > >  bounds,
const std::array< int, 2 >  nDev,
std::map< int, std::vector< int > >  steps 
)

funtion to plot merging factor

Definition at line 400 of file CDCDedx1DCellAlgorithm.cc.

402{
403
404 TCanvas cmfactor("cmfactor", "Merging factors", 800, 400);
405 cmfactor.Divide(2, 1);
406
407 for (int il = 0; il < 2; il++) {
408 Double_t* nvarBins;
409 nvarBins = &bounds[il][0];
410
411 TH1I* hist = new TH1I(Form("hist_%s", m_label[il].data()), "", nDev[il], nvarBins);
412 hist->SetTitle(Form("Merging factor for %s bins;binindex;merge-factors", m_label[il].data()));
413
414 for (int ibin = 0; ibin < nDev[il]; ibin++) hist->SetBinContent(ibin + 1, steps[il][ibin]);
415
416 cmfactor.cd(il + 1);
417 hist->SetFillColor(kYellow);
418 hist->Draw("hist");
419 delete hist;
420 }
421
422 cmfactor.SaveAs(Form("cdcdedx_1dcell_mergefactor%s.pdf", m_suffix.data()));
423 cmfactor.SaveAs(Form("cdcdedx_1dcell_mergefactor%s.root", m_suffix.data()));
424}

◆ plotQaPars()

void plotQaPars ( TH1D *  hentalay[2],
TH2D *  hptcosth 
)

funtion to draw pt vs costh and entrance angle distribution for Inner/Outer layer

Definition at line 503 of file CDCDedx1DCellAlgorithm.cc.

504{
505
506 TCanvas ceadist("ceadist", "Enta distributions", 800, 400);
507 ceadist.Divide(2, 1);
508
509 for (int il = 0; il < 2; il++) {
510
511 ceadist.cd(il + 1);
512 gPad->SetLogy();
513 hentalay[il]->SetFillColor(kYellow);
514 hentalay[il]->Draw("hist");
515 }
516
517 TCanvas cptcos("cptcos", "pt vs costh dist.", 400, 400);
518 cptcos.cd();
519 hptcosth->Draw("colz");
520
521 cptcos.SaveAs(Form("cdcdedx_ptcosth_%s.pdf", m_suffix.data()));
522 ceadist.SaveAs(Form("cdcdedx_1dcell_enta%s.pdf", m_suffix.data()));
523 ceadist.SaveAs(Form("cdcdedx_1dcell_enta%s.root", m_suffix.data()));
524}

◆ plotRelConst()

void plotRelConst ( std::vector< double >  tempconst,
std::vector< double >  layerconst,
int  il 
)

function to draw symm/Var layer constant

Definition at line 527 of file CDCDedx1DCellAlgorithm.cc.

528{
529
530 TH1D* hconst, *hconstvar;
531
532 Double_t* nvarBins;
533 nvarBins = &m_binValue[il][0];
534
535 hconst = new TH1D(Form("hconst%s", m_label[il].data()), "", m_eaBin, m_eaMin, m_eaMax);
536 std::string title = Form("calibration const dist: %s: (%s); entaRS (#alpha); entries", m_label[il].data(), m_runExp.data());
537 hconst->SetTitle(Form("%s", title.data()));
538
539 hconstvar = new TH1D(Form("hconstvar%s", m_label[il].data()), "", m_eaBinLocal[il], nvarBins);
540 title = Form("calibration const dist (var bins): %s: (%s); entaRS (#alpha);entries", m_label[il].data(), m_runExp.data());
541 hconstvar->SetTitle(Form("%s", title.data()));
542
543 if (isVarBins) {
544 for (int iea = 0; iea < m_eaBinLocal[il]; iea++)
545 hconstvar->SetBinContent(iea + 1, tempconst.at(iea));
546 }
547
548 for (int jea = 0; jea < m_eaBin; jea++) hconst->SetBinContent(jea + 1, layerconst.at(jea));
549
550 gStyle->SetOptStat("ne");
551 TCanvas cconst("cconst", "Calirbation Constants", 800, 400);
552 if (isVarBins) {
553 cconst.Divide(2, 1);
554 cconst.SetWindowSize(1000, 800);
555 }
556
557 cconst.cd(1);
558 hconst->SetFillColor(kYellow);
559 hconst->Draw("histo");
560 if (isVarBins) {
561 cconst.cd(2);
562 hconstvar->SetFillColor(kBlue);
563 hconstvar->Draw("hist");
564 }
565 cconst.SaveAs(Form("cdcdedx_1dcell_relconst%s_%s.pdf", m_label[il].data(), m_suffix.data()));
566 cconst.SaveAs(Form("cdcdedx_1dcell_relconst%s_%s.root", m_label[il].data(), m_suffix.data()));
567
568 delete hconst;
569 delete hconstvar;
570}

◆ resetInputJson()

void resetInputJson ( )
inlineprotectedinherited

Clears the m_inputJson member variable.

Definition at line 330 of file CalibrationAlgorithm.h.

330{m_jsonExecutionInput.clear();}

◆ resetOutputJson()

void resetOutputJson ( )
inlineprotectedinherited

Clears the m_outputJson member variable.

Definition at line 333 of file CalibrationAlgorithm.h.

333{m_jsonExecutionOutput.clear();}

◆ rotationalBin()

int rotationalBin ( int  nbin,
int  ibin 
)
inline

class funtion to set rotation symmetry

Definition at line 125 of file CDCDedx1DCellAlgorithm.h.

126 {
127 if (nbin % 4 != 0)return ibin;
128 int jbin = ibin;
129 if (ibin < nbin / 4) jbin = ibin + nbin / 2 ;
130 else if (ibin >= 3 * nbin / 4) jbin = ibin - nbin / 2 ;
131 return jbin;
132 }

◆ saveCalibration() [1/6]

void saveCalibration ( TClonesArray *  data,
const std::string &  name 
)
protectedinherited

Store DBArray payload with given name with default IOV.

Definition at line 297 of file CalibrationAlgorithm.cc.

298{
300}
const IntervalOfValidity & getRequestedIov() const
Getter for requested IOV.

◆ saveCalibration() [2/6]

void saveCalibration ( TClonesArray *  data,
const std::string &  name,
const IntervalOfValidity iov 
)
protectedinherited

Store DBArray with given name and custom IOV.

Definition at line 276 of file CalibrationAlgorithm.cc.

277{
278 B2DEBUG(29, "Saving calibration TClonesArray '" << name << "' to payloads list.");
279 getPayloads().emplace_back(name, data, iov);
280}

◆ saveCalibration() [3/6]

void saveCalibration ( TObject *  data)
protectedinherited

Store DB payload with default name and default IOV.

Definition at line 287 of file CalibrationAlgorithm.cc.

288{
289 saveCalibration(data, DataStore::objectName(data->IsA(), ""));
290}
static std::string objectName(const TClass *t, const std::string &name)
Return the storage name for an object of the given TClass and name.
Definition: DataStore.cc:151

◆ saveCalibration() [4/6]

void saveCalibration ( TObject *  data,
const IntervalOfValidity iov 
)
protectedinherited

Store DB payload with default name and custom IOV.

Definition at line 282 of file CalibrationAlgorithm.cc.

283{
284 saveCalibration(data, DataStore::objectName(data->IsA(), ""), iov);
285}

◆ saveCalibration() [5/6]

void saveCalibration ( TObject *  data,
const std::string &  name 
)
protectedinherited

Store DB payload with given name with default IOV.

Definition at line 292 of file CalibrationAlgorithm.cc.

293{
295}

◆ saveCalibration() [6/6]

void saveCalibration ( TObject *  data,
const std::string &  name,
const IntervalOfValidity iov 
)
protectedinherited

Store DB payload with given name and custom IOV.

Definition at line 270 of file CalibrationAlgorithm.cc.

271{
272 B2DEBUG(29, "Saving calibration TObject = '" << name << "' to payloads list.");
273 getPayloads().emplace_back(name, data, iov);
274}

◆ setBaselineFactor()

void setBaselineFactor ( double  charge,
double  factor 
)
inline

adjust baseline based on charge or global overall works for only single charge or both

Definition at line 111 of file CDCDedx1DCellAlgorithm.h.

112 {
113
114 m_adjustFac = factor;
115 if (charge < 0)m_chargeType = -1.0;
116 else if (charge > 0)m_chargeType = 1.0;
117 else if (charge == 0)m_chargeType = 0.0;
118 else
119 B2FATAL("Choose charge value either +/-1 or 0");
120 }

◆ setCosLimit()

void setCosLimit ( double  value)
inline

funtion to set cos #theta limit

Definition at line 105 of file CDCDedx1DCellAlgorithm.h.

105{m_cosMax = value;}

◆ setDescription()

void setDescription ( const std::string &  description)
inlineprotectedinherited

Set algorithm description (in constructor)

Definition at line 321 of file CalibrationAlgorithm.h.

321{m_description = description;}

◆ setInputFileNames() [1/2]

void setInputFileNames ( PyObject *  inputFileNames)
inherited

Set the input file names used for this algorithm from a Python list.

Set the input file names used for this algorithm and resolve the wildcards.

Definition at line 166 of file CalibrationAlgorithm.cc.

167{
168 // The reasoning for this very 'manual' approach to extending the Python interface
169 // (instead of using boost::python) is down to my fear of putting off final users with
170 // complexity on their side.
171 //
172 // I didn't want users that inherit from this class to be forced to use boost and
173 // to have to define a new python module just to use the CAF. A derived class from
174 // from a boost exposed class would need to have its own boost python module definition
175 // to allow access from a steering file and to the base class functions (I think).
176 // I also couldn't be bothered to write a full framework to get around the issue in a similar
177 // way to Module()...maybe there's an easy way.
178 //
179 // But this way we can allow people to continue using their ROOT implemented classes and inherit
180 // easily from this one. But add in a few helper functions that work with Python objects
181 // created in their steering file i.e. instead of being forced to use STL objects as input
182 // to the algorithm.
183 if (PyList_Check(inputFileNames)) {
184 boost::python::handle<> handle(boost::python::borrowed(inputFileNames));
185 boost::python::list listInputFileNames(handle);
186 auto vecInputFileNames = PyObjConvUtils::convertPythonObject(listInputFileNames, vector<string>());
187 setInputFileNames(vecInputFileNames);
188 } else {
189 B2ERROR("Tried to set the input files but we didn't receive a Python list.");
190 }
191}
void setInputFileNames(PyObject *inputFileNames)
Set the input file names used for this algorithm from a Python list.
Scalar convertPythonObject(const boost::python::object &pyObject, Scalar)
Convert from Python to given type.

◆ setInputFileNames() [2/2]

void setInputFileNames ( std::vector< std::string >  inputFileNames)
protectedinherited

Set the input file names used for this algorithm.

Set the input file names used for this algorithm and resolve the wildcards.

Definition at line 194 of file CalibrationAlgorithm.cc.

195{
196 // A lot of code below is tweaked from RootInputModule::initialize,
197 // since we're basically copying the functionality anyway.
198 if (inputFileNames.empty()) {
199 B2WARNING("You have called setInputFileNames() with an empty list. Did you mean to do that?");
200 return;
201 }
202 auto tmpInputFileNames = RootIOUtilities::expandWordExpansions(inputFileNames);
203
204 // We'll use a set to enforce sorted unique file paths as we check them
205 set<string> setInputFileNames;
206 // Check that files exist and convert to absolute paths
207 for (auto path : tmpInputFileNames) {
208 string fullPath = fs::absolute(path).string();
209 if (fs::exists(fullPath)) {
210 setInputFileNames.insert(fs::canonical(fullPath).string());
211 } else {
212 B2WARNING("Couldn't find the file " << path);
213 }
214 }
215
216 if (setInputFileNames.empty()) {
217 B2WARNING("No valid files specified!");
218 return;
219 } else {
220 // Reset the run -> files map as our files are likely different
221 m_runsToInputFiles.clear();
222 }
223
224 // Open TFile to check they can be accessed by ROOT
225 TDirectory* dir = gDirectory;
226 for (const string& fileName : setInputFileNames) {
227 unique_ptr<TFile> f;
228 try {
229 f.reset(TFile::Open(fileName.c_str(), "READ"));
230 } catch (logic_error&) {
231 //this might happen for ~invaliduser/foo.root
232 //actually undefined behaviour per standard, reported as ROOT-8490 in JIRA
233 }
234 if (!f || !f->IsOpen()) {
235 B2FATAL("Couldn't open input file " + fileName);
236 }
237 }
238 dir->cd();
239
240 // Copy the entries of the set to a vector
241 m_inputFileNames = vector<string>(setInputFileNames.begin(), setInputFileNames.end());
243}
std::string getGranularityFromData() const
Get the granularity of collected data.
std::vector< std::string > expandWordExpansions(const std::vector< std::string > &filenames)
Performs wildcard expansion using wordexp(), returns matches.

◆ setLayerTrunc()

void setLayerTrunc ( bool  value = false)
inline

funtion to set truncation method (local vs global)

Definition at line 66 of file CDCDedx1DCellAlgorithm.h.

66{isFixTrunc = value;}

◆ setMergePayload()

void setMergePayload ( bool  value)
inline

set false if generating absoulte (not relative) payload

Definition at line 72 of file CDCDedx1DCellAlgorithm.h.

72{ isMerge = value;}

◆ setOutputJsonValue()

void setOutputJsonValue ( const std::string &  key,
const T &  value 
)
inlineprotectedinherited

Set a key:value pair for the outputJson object, expected to used interally during calibrate()

Definition at line 337 of file CalibrationAlgorithm.h.

337{m_jsonExecutionOutput[key] = value;}

◆ setPrefix()

void setPrefix ( const std::string &  prefix)
inlineinherited

Set the prefix used to identify datastore objects.

Definition at line 167 of file CalibrationAlgorithm.h.

167{m_prefix = prefix;}

◆ setPtLimit()

void setPtLimit ( double  value)
inline

funtion to set pt limit

Definition at line 100 of file CDCDedx1DCellAlgorithm.h.

100{m_ptMax = value;}

◆ setRotSymmetry()

void setRotSymmetry ( bool  value)
inline

set rotation sys to copy constants from one region to other

Definition at line 82 of file CDCDedx1DCellAlgorithm.h.

82{isRotSymm = value;}

◆ setSplitFactor()

void setSplitFactor ( int  value)
inline

set bin split factor for all range

Definition at line 77 of file CDCDedx1DCellAlgorithm.h.

77{m_binSplit = value;}

◆ setSuffix()

void setSuffix ( const std::string &  value)
inline

adding suffix to control plots

Definition at line 56 of file CDCDedx1DCellAlgorithm.h.

56{m_suffix = value;}

◆ setTrucationBins()

void setTrucationBins ( double  lowedge,
double  upedge 
)
inline

function to set bins of trunction from histogram

Definition at line 87 of file CDCDedx1DCellAlgorithm.h.

88 {
89 m_truncMin = lowedge; m_truncMax = upedge ;
90 }

◆ setVariableBins()

void setVariableBins ( bool  value)
inline

Set Var bins flag to on or off.

Definition at line 61 of file CDCDedx1DCellAlgorithm.h.

61{isVarBins = value;}

◆ updateDBObjPtrs()

void updateDBObjPtrs ( const unsigned int  event = 1,
const int  run = 0,
const int  experiment = 0 
)
protectedinherited

Updates any DBObjPtrs by calling update(event) for DBStore.

Definition at line 404 of file CalibrationAlgorithm.cc.

405{
406 // Construct an EventMetaData object but NOT in the Datastore
407 EventMetaData emd(event, run, experiment);
408 // Explicitly update while avoiding registering a Datastore object
410 // Also update the intra-run objects to the event at the same time (maybe unnessary...)
412}
Store event, run, and experiment numbers.
Definition: EventMetaData.h:33
static DBStore & Instance()
Instance of a singleton DBStore.
Definition: DBStore.cc:28
void updateEvent()
Updates all intra-run dependent objects.
Definition: DBStore.cc:142
void update()
Updates all objects that are outside their interval of validity.
Definition: DBStore.cc:79

Member Data Documentation

◆ isFixTrunc

bool isFixTrunc
private

true = fix window for all out/inner layers

Definition at line 230 of file CDCDedx1DCellAlgorithm.h.

◆ isMakePlots

bool isMakePlots
private

produce plots for status

Definition at line 233 of file CDCDedx1DCellAlgorithm.h.

◆ isMerge

bool isMerge
private

print more debug information

Definition at line 235 of file CDCDedx1DCellAlgorithm.h.

◆ isPrintLog

bool isPrintLog
private

print more debug information

Definition at line 234 of file CDCDedx1DCellAlgorithm.h.

◆ isRotSymm

bool isRotSymm
private

if rotation symmtery requested

Definition at line 232 of file CDCDedx1DCellAlgorithm.h.

◆ isVarBins

bool isVarBins
private

true: if variable bin size is requested

Definition at line 231 of file CDCDedx1DCellAlgorithm.h.

◆ m_adjustFac

double m_adjustFac
private

faactor with that one what to adjust baseline

Definition at line 228 of file CDCDedx1DCellAlgorithm.h.

◆ m_allExpRun

const ExpRun m_allExpRun = make_pair(-1, -1)
staticprivateinherited

allExpRun

Definition at line 364 of file CalibrationAlgorithm.h.

◆ m_binIndex

std::array<std::vector<int>, 2> m_binIndex
private

symm/Var bin numebrs

Definition at line 242 of file CDCDedx1DCellAlgorithm.h.

◆ m_binMerge

int m_binMerge
private

merge bins by this factor in (-pi/2 <-> -pi/4) and (pi/4 <-> pi/2) region

Definition at line 225 of file CDCDedx1DCellAlgorithm.h.

◆ m_binSplit

int m_binSplit
private

multiply nbins by this factor in full range

Definition at line 224 of file CDCDedx1DCellAlgorithm.h.

◆ m_binValue

std::array<std::vector<double>, 2> m_binValue
private

etna Var bin values

Definition at line 243 of file CDCDedx1DCellAlgorithm.h.

◆ m_boundaries

std::vector<Calibration::ExpRun> m_boundaries
protectedinherited

When using the boundaries functionality from isBoundaryRequired, this is used to store the boundaries. It is cleared when.

Definition at line 261 of file CalibrationAlgorithm.h.

◆ m_chargeType

double m_chargeType
private

charge type for baseline adj

Definition at line 227 of file CDCDedx1DCellAlgorithm.h.

◆ m_cosMax

double m_cosMax
private

a limit on cos theta

Definition at line 219 of file CDCDedx1DCellAlgorithm.h.

◆ m_data

ExecutionData m_data
privateinherited

Data specific to a SINGLE execution of the algorithm. Gets reset at the beginning of execution.

Definition at line 382 of file CalibrationAlgorithm.h.

◆ m_DBOneDCell

DBObjPtr<CDCDedx1DCell> m_DBOneDCell
private

One cell correction DB object.

Definition at line 247 of file CDCDedx1DCellAlgorithm.h.

◆ m_dedxBin

int m_dedxBin
private

of bins for dedxhit range

Definition at line 216 of file CDCDedx1DCellAlgorithm.h.

◆ m_dedxMax

double m_dedxMax
private

upper edge of dedxhit

Definition at line 215 of file CDCDedx1DCellAlgorithm.h.

◆ m_dedxMin

double m_dedxMin
private

lower edge of dedxhit

Definition at line 214 of file CDCDedx1DCellAlgorithm.h.

◆ m_description

std::string m_description {""}
privateinherited

Description of the algorithm.

Definition at line 385 of file CalibrationAlgorithm.h.

◆ m_eaBin

int m_eaBin
private

of bins for etna angle

Definition at line 212 of file CDCDedx1DCellAlgorithm.h.

◆ m_eaBinLocal

std::vector<int> m_eaBinLocal
private

of var bins for etna angle

Definition at line 241 of file CDCDedx1DCellAlgorithm.h.

◆ m_eaBW

double m_eaBW
private

binwdith of enta angle bin

Definition at line 211 of file CDCDedx1DCellAlgorithm.h.

◆ m_eaMax

double m_eaMax
private

upper edge of enta angle

Definition at line 210 of file CDCDedx1DCellAlgorithm.h.

◆ m_eaMin

double m_eaMin
private

lower edge of enta angle

Definition at line 209 of file CDCDedx1DCellAlgorithm.h.

◆ m_granularityOfData

std::string m_granularityOfData
privateinherited

Granularity of input data. This only changes when the input files change so it isn't specific to an execution.

Definition at line 379 of file CalibrationAlgorithm.h.

◆ m_inputFileNames

std::vector<std::string> m_inputFileNames
privateinherited

List of input files to the Algorithm, will initially be user defined but then gets the wildcards expanded during execute()

Definition at line 373 of file CalibrationAlgorithm.h.

◆ m_jsonExecutionInput

nlohmann::json m_jsonExecutionInput = nlohmann::json::object()
privateinherited

Optional input JSON object used to make decisions about how to execute the algorithm code.

Definition at line 397 of file CalibrationAlgorithm.h.

◆ m_jsonExecutionOutput

nlohmann::json m_jsonExecutionOutput = nlohmann::json::object()
privateinherited

Optional output JSON object that can be set during the execution by the underlying algorithm code.

Definition at line 403 of file CalibrationAlgorithm.h.

◆ m_label

std::string m_label[2] = {"IL", "OL"}
private

add inner/outer layer label

Definition at line 239 of file CDCDedx1DCellAlgorithm.h.

◆ m_onedcors

std::vector<std::vector<double> > m_onedcors
private

final vectors of calibration

Definition at line 245 of file CDCDedx1DCellAlgorithm.h.

◆ m_prefix

std::string m_prefix {""}
privateinherited

The name of the TDirectory the collector objects are contained within.

Definition at line 388 of file CalibrationAlgorithm.h.

◆ m_ptMax

double m_ptMax
private

a limit on transverse momentum

Definition at line 218 of file CDCDedx1DCellAlgorithm.h.

◆ m_runExp

std::string m_runExp
private

add suffix to all plot name

Definition at line 238 of file CDCDedx1DCellAlgorithm.h.

◆ m_runsToInputFiles

std::map<Calibration::ExpRun, std::vector<std::string> > m_runsToInputFiles
privateinherited

Map of Runs to input files. Gets filled when you call getRunRangeFromAllData, gets cleared when setting input files again.

Definition at line 376 of file CalibrationAlgorithm.h.

◆ m_suffix

std::string m_suffix
private

add suffix to all plot name

Definition at line 237 of file CDCDedx1DCellAlgorithm.h.

◆ m_truncMax

double m_truncMax
private

uppr thershold on truncation

Definition at line 222 of file CDCDedx1DCellAlgorithm.h.

◆ m_truncMin

double m_truncMin
private

lower thershold on truncation

Definition at line 221 of file CDCDedx1DCellAlgorithm.h.


The documentation for this class was generated from the following files: