14. How to document your code with Sphinx#

Our sphinx setup is rather simple: First it will include the framework documentation and then it will go through all packages alphabetically and include any files ending in index*.rst in a subdirectory doc in the package directory, also alphabetically. It will ignore all other files in this directory or any files in sub directories. So for example if we have

analysis/doc/
    index.rst
    variables.rst
    an_image.png
    variable_groups/01-Kinematics.rst
    variable_groups/02-PID.rst
calibration/doc/
    index_caf.rst
framework/doc/
    index-01-install.rst
    index-02-tools.rst

It would include the files in the global table contents in the order

  • framework/doc/index-01-install.rst

  • framework/doc/index-02-tools.rst

  • analysis/doc/index.rst

  • calibration/doc/index_caf.rst

Note

.rst files not starting with index in the sub directory variable_groups are not included in the top level tree

The packages are free to structure their documents as they see fit considering the following rules:

  1. Everything in one .rst file ends up in one single html page

  2. Every top level heading in included index*.rst will create one top-level heading in the global table of contents (aka one part in the pdf version)

  3. Every top heading in these included files will create one top level heading in the global table of contents

  4. Sphinx documentation is intended to be one big documentation tree, that means all existing .rst Files should be included in one toctree directive, for example in the analysis/index.rst we could have something like

    Analysis Package
================

Some text describing the structure of the package

.. toctree:
   :glob:

   variables
   variable_groups/*

    This would include first analysis/variables.rst and then all .rst files in analysis/variable_groups/ alphabetically. Top level headings in those files will be treated as sub-sections to the “Analysis Package”. This will be rendered as a nested list of document titles (the first heading in those files)

  1. Every file can limit the depth to which the table of contents is expanded by adding :tocdepth: N at the top of the file. The global table of contents is limited to two levels.

    Note

    This will not have any effect on latex output. For the PDF output the depth of the table of contents is always set to 3 levels