Belle II Software development
PXDClusterizerModule Class Reference

The PXDClusterizer module. More...

#include <PXDClusterizerModule.h>

Inheritance diagram for PXDClusterizerModule:
Module PathElement

Public Types

typedef std::vector< const RelationElement * > RelationLookup
 Container for a RelationArray Lookup table.
 
enum  EModulePropFlags {
  c_Input = 1 ,
  c_Output = 2 ,
  c_ParallelProcessingCertified = 4 ,
  c_HistogramManager = 8 ,
  c_InternalSerializer = 16 ,
  c_TerminateInAllProcesses = 32 ,
  c_DontCollectStatistics = 64
}
 Each module can be tagged with property flags, which indicate certain features of the module. More...
 
typedef ModuleCondition::EAfterConditionPath EAfterConditionPath
 Forward the EAfterConditionPath definition from the ModuleCondition.
 

Public Member Functions

 PXDClusterizerModule ()
 Constructor defining the parameters.
 
virtual void initialize () override
 Initialize the module.
 
virtual void beginRun () override
 do at every run change
 
virtual void event () override
 do the clustering
 
virtual std::vector< std::string > getFileNames (bool outputFiles)
 Return a list of output filenames for this modules.
 
virtual void endRun ()
 This method is called if the current run ends.
 
virtual void terminate ()
 This method is called at the end of the event processing.
 
const std::string & getName () const
 Returns the name of the module.
 
const std::string & getType () const
 Returns the type of the module (i.e.
 
const std::string & getPackage () const
 Returns the package this module is in.
 
const std::string & getDescription () const
 Returns the description of the module.
 
void setName (const std::string &name)
 Set the name of the module.
 
void setPropertyFlags (unsigned int propertyFlags)
 Sets the flags for the module properties.
 
LogConfiggetLogConfig ()
 Returns the log system configuration.
 
void setLogConfig (const LogConfig &logConfig)
 Set the log system configuration.
 
void setLogLevel (int logLevel)
 Configure the log level.
 
void setDebugLevel (int debugLevel)
 Configure the debug messaging level.
 
void setAbortLevel (int abortLevel)
 Configure the abort log level.
 
void setLogInfo (int logLevel, unsigned int logInfo)
 Configure the printed log information for the given level.
 
void if_value (const std::string &expression, const std::shared_ptr< Path > &path, EAfterConditionPath afterConditionPath=EAfterConditionPath::c_End)
 Add a condition to the module.
 
void if_false (const std::shared_ptr< Path > &path, EAfterConditionPath afterConditionPath=EAfterConditionPath::c_End)
 A simplified version to add a condition to the module.
 
void if_true (const std::shared_ptr< Path > &path, EAfterConditionPath afterConditionPath=EAfterConditionPath::c_End)
 A simplified version to set the condition of the module.
 
bool hasCondition () const
 Returns true if at least one condition was set for the module.
 
const ModuleConditiongetCondition () const
 Return a pointer to the first condition (or nullptr, if none was set)
 
const std::vector< ModuleCondition > & getAllConditions () const
 Return all set conditions for this module.
 
bool evalCondition () const
 If at least one condition was set, it is evaluated and true returned if at least one condition returns true.
 
std::shared_ptr< PathgetConditionPath () const
 Returns the path of the last true condition (if there is at least one, else reaturn a null pointer).
 
Module::EAfterConditionPath getAfterConditionPath () const
 What to do after the conditional path is finished.
 
std::vector< std::shared_ptr< Path > > getAllConditionPaths () const
 Return all condition paths currently set (no matter if the condition is true or not).
 
bool hasProperties (unsigned int propertyFlags) const
 Returns true if all specified property flags are available in this module.
 
bool hasUnsetForcedParams () const
 Returns true and prints error message if the module has unset parameters which the user has to set in the steering file.
 
const ModuleParamListgetParamList () const
 Return module param list.
 
template<typename T >
ModuleParam< T > & getParam (const std::string &name) const
 Returns a reference to a parameter.
 
bool hasReturnValue () const
 Return true if this module has a valid return value set.
 
int getReturnValue () const
 Return the return value set by this module.
 
std::shared_ptr< PathElementclone () const override
 Create an independent copy of this module.
 
std::shared_ptr< boost::python::list > getParamInfoListPython () const
 Returns a python list of all parameters.
 

Static Public Member Functions

static void exposePythonAPI ()
 Exposes methods of the Module class to Python.
 

Protected Member Functions

virtual void def_initialize ()
 Wrappers to make the methods without "def_" prefix callable from Python.
 
virtual void def_beginRun ()
 Wrapper method for the virtual function beginRun() that has the implementation to be used in a call from Python.
 
virtual void def_event ()
 Wrapper method for the virtual function event() that has the implementation to be used in a call from Python.
 
virtual void def_endRun ()
 This method can receive that the current run ends as a call from the Python side.
 
virtual void def_terminate ()
 Wrapper method for the virtual function terminate() that has the implementation to be used in a call from Python.
 
void setDescription (const std::string &description)
 Sets the description of the module.
 
void setType (const std::string &type)
 Set the module type.
 
template<typename T >
void addParam (const std::string &name, T &paramVariable, const std::string &description, const T &defaultValue)
 Adds a new parameter to the module.
 
template<typename T >
void addParam (const std::string &name, T &paramVariable, const std::string &description)
 Adds a new enforced parameter to the module.
 
void setReturnValue (int value)
 Sets the return value for this module as integer.
 
void setReturnValue (bool value)
 Sets the return value for this module as bool.
 
void setParamList (const ModuleParamList &params)
 Replace existing parameter list.
 

Private Member Functions

void createRelationLookup (const RelationArray &relation, RelationLookup &lookup, size_t digits)
 Create lookup maps for Relations We do not use the RelationIndex as we know much more about the relations: we know the relations get created in a consolidated way by the Digitizer and that they already point in the right direction so we only need to speed up finding the correct element.
 
void fillRelationMap (const RelationLookup &lookup, std::map< unsigned int, float > &relation, unsigned int index)
 Add the relation from a given PXDDigit index to a map.
 
void writeClusters (VxdID sensorID)
 Write clusters to collection.
 
void calculatePositionError (const ClusterCandidate &cls, ClusterProjection &primary, const ClusterProjection &secondary, double minPitch, double centerPitch, double maxPitch)
 Calculate position and error for a given cluster.
 
void assignPositionErrorFromDB (ClusterProjection &primary, PXDClusterPositionErrorPar errorPar, VxdID sensorID, unsigned int uCell, unsigned int vCell, double centerPitch, bool isAtUEdge=false, bool isAtVEdge=false, bool isAdjacentDead=false)
 Assign position error for a given cluster from DB.
 
std::list< ModulePtrgetModules () const override
 no submodules, return empty list
 
std::string getPathString () const override
 return the module name.
 
void setParamPython (const std::string &name, const boost::python::object &pyObj)
 Implements a method for setting boost::python objects.
 
void setParamPythonDict (const boost::python::dict &dictionary)
 Implements a method for reading the parameter values from a boost::python dictionary.
 

Private Attributes

double m_elNoise
 Noise in ADU.
 
double m_cutSeed
 Seed cut in sigma.
 
double m_cutAdjacent
 Noise cut in sigma.
 
double m_cutCluster
 Cluster cut in sigma.
 
double m_cutAdjacentSignal
 Signal in ADU for Adjacent cut, basically m_elNoise*m_cutAdjacent.
 
std::string m_storeDigitsName
 Name of the collection to use for the PXDDigits.
 
std::string m_storeClustersName
 Name of the collection to use for the PXDClusters.
 
std::string m_storeTrueHitsName
 Name of the collection to use for the PXDTrueHits.
 
std::string m_storeMCParticlesName
 Name of the collection to use for the MCParticles.
 
std::string m_relDigitMCParticleName
 Name of the relation between PXDDigits and MCParticles.
 
std::string m_relClusterMCParticleName
 Name of the relation between PXDClusters and MCParticles.
 
std::string m_relClusterDigitName
 Name of the relation between PXDClusters and PXDDigits.
 
std::string m_relDigitTrueHitName
 Name of the relation between PXDDigits and PXDTrueHits.
 
std::string m_relClusterTrueHitName
 Name of the relation between PXDClusters and PXDTrueHits.
 
int m_sizeHeadTail
 Size of the cluster at which we switch from Center of Gravity to Analog Head Tail.
 
int m_clusterCacheSize
 Size of cluster Cache (0 = default)
 
std::unique_ptr< ClusterCachem_cache
 cache of the last seen clusters to speed up clustering
 
NoiseMap m_noiseMap
 Noise map for the currently active sensor.
 
RelationLookup m_mcRelation
 Lookup table for PXDDigit->MCParticle relation.
 
RelationLookup m_trueRelation
 Lookup table for PXDDigit->PXDTrueHit relation.
 
bool m_errorFromDB
 Flag to set cluster position error from DB (default = true)
 
std::string m_positionErrorUName
 Name of the DB payload containing cluster posotion errors in U.
 
std::string m_positionErrorVName
 Name of the DB payload containing cluster posotion errors in V.
 
std::unique_ptr< DBObjPtr< PXDClusterPositionErrorPar > > m_clusterPositionErrorUPar
 DB object for cluster posotion errors in U.
 
std::unique_ptr< DBObjPtr< PXDClusterPositionErrorPar > > m_clusterPositionErrorVPar
 DB object for cluster posotion errors in V.
 
StoreObjPtr< EventLevelTrackingInfom_eventLevelTrackingInfo
 StoreObject to access the event level tracking information.
 
bool m_createPXDClustersForAbortedTrackingEvents = false
 bool to override the EventLevelTrackingInfo abort flag decision
 
std::string m_name
 The name of the module, saved as a string (user-modifiable)
 
std::string m_type
 The type of the module, saved as a string.
 
std::string m_package
 Package this module is found in (may be empty).
 
std::string m_description
 The description of the module.
 
unsigned int m_propertyFlags
 The properties of the module as bitwise or (with |) of EModulePropFlags.
 
LogConfig m_logConfig
 The log system configuration of the module.
 
ModuleParamList m_moduleParamList
 List storing and managing all parameter of the module.
 
bool m_hasReturnValue
 True, if the return value is set.
 
int m_returnValue
 The return value.
 
std::vector< ModuleConditionm_conditions
 Module condition, only non-null if set.
 

Detailed Description

The PXDClusterizer module.

This module is responsible to cluster all hits found in the PXD and write them to the appropriate collections. It does this in a "streaming" way: The hits are examined in an ordered way (sorted by v Id, then by u Id) and for each pixel we only have to check the left neighbor and the three adjacent hits in the last row. By caching the last row, each pixel gets examined only once and the 4 adjacent pixels are accessed in constant time.

See also
ClusterCache

Definition at line 43 of file PXDClusterizerModule.h.

Member Typedef Documentation

◆ EAfterConditionPath

Forward the EAfterConditionPath definition from the ModuleCondition.

Definition at line 88 of file Module.h.

◆ RelationLookup

typedef std::vector<const RelationElement*> RelationLookup

Container for a RelationArray Lookup table.

Definition at line 47 of file PXDClusterizerModule.h.

Member Enumeration Documentation

◆ EModulePropFlags

enum EModulePropFlags
inherited

Each module can be tagged with property flags, which indicate certain features of the module.

Enumerator
c_Input 

This module is an input module (reads data).

c_Output 

This module is an output module (writes data).

c_ParallelProcessingCertified 

This module can be run in parallel processing mode safely (All I/O must be done through the data store, in particular, the module must not write any files.)

c_HistogramManager 

This module is used to manage histograms accumulated by other modules.

c_InternalSerializer 

This module is an internal serializer/deserializer for parallel processing.

c_TerminateInAllProcesses 

When using parallel processing, call this module's terminate() function in all processes().

This will also ensure that there is exactly one process (single-core if no parallel modules found) or at least one input, one main and one output process.

c_DontCollectStatistics 

No statistics is collected for this module.

Definition at line 77 of file Module.h.

77 {
78 c_Input = 1,
79 c_Output = 2,
85 };
@ c_HistogramManager
This module is used to manage histograms accumulated by other modules.
Definition: Module.h:81
@ c_Input
This module is an input module (reads data).
Definition: Module.h:78
@ c_DontCollectStatistics
No statistics is collected for this module.
Definition: Module.h:84
@ c_ParallelProcessingCertified
This module can be run in parallel processing mode safely (All I/O must be done through the data stor...
Definition: Module.h:80
@ c_InternalSerializer
This module is an internal serializer/deserializer for parallel processing.
Definition: Module.h:82
@ c_Output
This module is an output module (writes data).
Definition: Module.h:79
@ c_TerminateInAllProcesses
When using parallel processing, call this module's terminate() function in all processes().
Definition: Module.h:83

Constructor & Destructor Documentation

◆ PXDClusterizerModule()

Constructor defining the parameters.

Definition at line 42 of file PXDClusterizerModule.cc.

42 : Module()
43 , m_elNoise(0.7), m_cutSeed(5.0), m_cutAdjacent(3.0), m_cutCluster(8.0)
45{
46 //Set module properties
47 setDescription("Cluster PXDHits");
49
50 addParam("ElectronicNoise", m_elNoise,
51 "Noise added by the electronics, set in ADU", m_elNoise);
52 addParam("NoiseSN", m_cutAdjacent,
53 "SN for digits to be considered for clustering", m_cutAdjacent);
54 addParam("SeedSN", m_cutSeed, "SN for digits to be considered as seed",
55 m_cutSeed);
56 addParam("ClusterSN", m_cutCluster, "Minimum SN for clusters", m_cutCluster);
57 addParam("ClusterCacheSize", m_clusterCacheSize,
58 "Maximum desired number of sensor rows", 0);
59 addParam("HeadTailSize", m_sizeHeadTail,
60 "Minimum cluster size to switch to Analog head tail algorithm for cluster center",
62 addParam("Digits", m_storeDigitsName, "Digits collection name", string(""));
63 addParam("Clusters", m_storeClustersName, "Cluster collection name",
64 string(""));
65 addParam("TrueHits", m_storeTrueHitsName, "TrueHit collection name",
66 string(""));
67 addParam("MCParticles", m_storeMCParticlesName, "MCParticles collection name",
68 string(""));
69 addParam("ErrorFromDB", m_errorFromDB, "Assign cluster position error from DB", true);
70 addParam("PositionErrorUPayloadName", m_positionErrorUName, "Payload name for cluster position error in U",
71 string("PXDClusterPositionErrorUPar"));
72 addParam("PositionErrorVPayloadName", m_positionErrorVName, "Payload name for cluster position error in V",
73 string("PXDClusterPositionErrorVPar"));
74 addParam("createPXDClustersForAbortedTrackingEvents", m_createPXDClustersForAbortedTrackingEvents,
75 "Create PXDClusters for events where either the SVDSpacePointCreator abort flag or the VXDTF2 and SVDCKF abort flags are set.",
77
78}
void setDescription(const std::string &description)
Sets the description of the module.
Definition: Module.cc:214
void setPropertyFlags(unsigned int propertyFlags)
Sets the flags for the module properties.
Definition: Module.cc:208
Module()
Constructor.
Definition: Module.cc:30
int m_clusterCacheSize
Size of cluster Cache (0 = default)
double m_cutAdjacentSignal
Signal in ADU for Adjacent cut, basically m_elNoise*m_cutAdjacent.
std::string m_positionErrorVName
Name of the DB payload containing cluster posotion errors in V.
bool m_createPXDClustersForAbortedTrackingEvents
bool to override the EventLevelTrackingInfo abort flag decision
double m_cutCluster
Cluster cut in sigma.
std::string m_storeTrueHitsName
Name of the collection to use for the PXDTrueHits.
std::string m_storeMCParticlesName
Name of the collection to use for the MCParticles.
std::string m_positionErrorUName
Name of the DB payload containing cluster posotion errors in U.
int m_sizeHeadTail
Size of the cluster at which we switch from Center of Gravity to Analog Head Tail.
std::string m_storeDigitsName
Name of the collection to use for the PXDDigits.
std::string m_storeClustersName
Name of the collection to use for the PXDClusters.
bool m_errorFromDB
Flag to set cluster position error from DB (default = true)
double m_cutAdjacent
Noise cut in sigma.
void addParam(const std::string &name, T &paramVariable, const std::string &description, const T &defaultValue)
Adds a new parameter to the module.
Definition: Module.h:560

Member Function Documentation

◆ assignPositionErrorFromDB()

void assignPositionErrorFromDB ( ClusterProjection primary,
PXDClusterPositionErrorPar  errorPar,
VxdID  sensorID,
unsigned int  uCell,
unsigned int  vCell,
double  centerPitch,
bool  isAtUEdge = false,
bool  isAtVEdge = false,
bool  isAdjacentDead = false 
)
private

Assign position error for a given cluster from DB.

Parameters
primaryProjection of the cluster to assign the position error for
errorParDB payload containing PXDClusterPositionErrorPar
sensorIDVxdID
uCellu cell ID of the cluster position
vCellv cell ID of the cluster position
centerPitchPitch between pixel cells
isAtUEdgetrue if the cluster is at sensor U edge
isAtVEdgetrue if the cluster is at sensor V edge
isAdjacentDeadtrue if the cluster is neighbouring dead pixels

Definition at line 464 of file PXDClusterizerModule.cc.

467{
468 // Get bins from cell ID
469 unsigned short uBin = PXD::getBinU(sensorID, uCell, vCell, errorPar.getBinsU());
470 unsigned short vBin = PXD::getBinV(sensorID, vCell, errorPar.getBinsV());
471 // Get error from DB [in units of pix]
472 double error = errorPar.getContent(sensorID.getID(), uBin, vBin, primary.getSize());
473 double sf = 1.;
474 // Apply additional factor if at sensor edges or adjacent to daed rows/colums
475 if (isAtUEdge) sf *= errorPar.getSensorUEdgeFactor(sensorID.getID(), uBin, vBin, primary.getSize());
476 if (isAtVEdge) sf *= errorPar.getSensorVEdgeFactor(sensorID.getID(), uBin, vBin, primary.getSize());
477 if (isAdjacentDead) sf *= errorPar.getDeadNeighbourFactor(sensorID.getID(), uBin, vBin, primary.getSize());
478 // Set error (convert to [um])
479 if (error) primary.setError(sf * error * centerPitch); // zero means default values to use analytic error
480
481}
float getContent(unsigned short sensorID, unsigned short globalID) const
Get content.
unsigned short getBinsV() const
Get number of bins along sensor v side.
float getDeadNeighbourFactor(unsigned short sensorID, unsigned short globalID) const
Get scaling factor when neighbouring dead rows/column.
unsigned short getBinsU() const
Get number of bins along sensor u side.
float getSensorVEdgeFactor(unsigned short sensorID, unsigned short globalID) const
Get scaling factor at sensor edge in V.
float getSensorUEdgeFactor(unsigned short sensorID, unsigned short globalID) const
Get scaling factor at sensor edge in U.
void setError(double error)
Set the error of the cluster.
unsigned int getSize() const
Return the projected size of the cluster.
baseType getID() const
Get the unique id.
Definition: VxdID.h:94
unsigned short getBinU(VxdID id, unsigned int uid, unsigned int vid, unsigned short nBinsU)
Function to return a bin number for equal sized binning in U.
Definition: PXDUtilities.h:161
unsigned short getBinV(VxdID id, unsigned int vid, unsigned short nBinsV)
Function to return a bin number for equal sized binning in V.
Definition: PXDUtilities.h:171

◆ beginRun()

void beginRun ( void  )
overridevirtual

do at every run change

Reimplemented from Module.

Definition at line 168 of file PXDClusterizerModule.cc.

169{
170 // Need to check if payload should be re-loaded at run change (currently just one revision for the entire period)
171 if (m_errorFromDB && (!m_clusterPositionErrorUPar->isValid() || !m_clusterPositionErrorVPar.get()->isValid())) {
172 B2FATAL("DB objects for ClusterPositionError not valid for this run");
173 }
174}
std::unique_ptr< DBObjPtr< PXDClusterPositionErrorPar > > m_clusterPositionErrorVPar
DB object for cluster posotion errors in V.
std::unique_ptr< DBObjPtr< PXDClusterPositionErrorPar > > m_clusterPositionErrorUPar
DB object for cluster posotion errors in U.

◆ calculatePositionError()

void calculatePositionError ( const ClusterCandidate cls,
ClusterProjection primary,
const ClusterProjection secondary,
double  minPitch,
double  centerPitch,
double  maxPitch 
)
private

Calculate position and error for a given cluster.

Parameters
clsClusterCandidate of the cluster
primaryProjection of the cluster to calculate the position and error for
secondaryProjection of the cluster in the other direction
minPitchPitch at the minimum cell of the cluster
centerPitchPitch between pixel cells
maxPitchPitch at the maximum cell of the cluster

Definition at line 439 of file PXDClusterizerModule.cc.

441{
442 if (primary.getSize() >= static_cast<unsigned int>(m_sizeHeadTail)) { //Analog head tail
443 //Average charge in the central area
444 const double centerCharge = primary.getCenterCharge() / (primary.getSize() - 2);
445 const double minCharge = (primary.getMinCharge() < centerCharge) ? primary.getMinCharge() : centerCharge;
446 const double maxCharge = (primary.getMaxCharge() < centerCharge) ? primary.getMaxCharge() : centerCharge;
447 primary.setPos(0.5 * (primary.getMinPos() + primary.getMaxPos()
448 + (maxCharge * maxPitch - minCharge * minPitch) / centerCharge));
449 const double snHead = centerCharge / m_cutAdjacentSignal / minPitch;
450 const double snTail = centerCharge / m_cutAdjacentSignal / maxPitch;
451 const double landauHead = minCharge / centerCharge * minPitch;
452 const double landauTail = maxCharge / centerCharge * maxPitch;
453 primary.setError(0.5 * sqrt(1.0 / snHead / snHead + 1.0 / snTail / snTail
454 + 0.5 * landauHead * landauHead + 0.5 * landauTail * landauTail));
455 } else if (primary.getSize() <= 2) { // Add a phantom charge to second strip
456 primary.setError(centerPitch * (secondary.getSize() + 2) * m_cutAdjacentSignal / (primary.getCharge() +
457 (secondary.getSize() + 3) * m_cutAdjacentSignal));
458 } else {
459 const double sn = cls.getSeedCharge() / m_elNoise;
460 primary.setError(2.0 * centerPitch / sn);
461 }
462}
float getSeedCharge() const
get the seed charge of the cluster
double getMinPos() const
Return the position of the minimum cell of the cluster.
double getMaxCharge() const
Return the charge in the maximum cell of the cluster.
double getCharge() const
Return the total charge of the cluster.
void setPos(double pos)
Set the position of the cluster.
double getMinCharge() const
Return the charge in the minimum cell of the cluster.
double getMaxPos() const
Return the position of the maximum cell of the cluster.
double getCenterCharge() const
Return the center charge of the cluster, that is total charge minus minimum and maximum cell charge.
double sqrt(double a)
sqrt for double
Definition: beamHelpers.h:28

◆ clone()

std::shared_ptr< PathElement > clone ( ) const
overridevirtualinherited

Create an independent copy of this module.

Note that parameters are shared, so changing them on a cloned module will also affect the original module.

Implements PathElement.

Definition at line 179 of file Module.cc.

180{
182 newModule->m_moduleParamList.setParameters(getParamList());
183 newModule->setName(getName());
184 newModule->m_package = m_package;
185 newModule->m_propertyFlags = m_propertyFlags;
186 newModule->m_logConfig = m_logConfig;
187 newModule->m_conditions = m_conditions;
188
189 return newModule;
190}
std::shared_ptr< Module > registerModule(const std::string &moduleName, std::string sharedLibPath="") noexcept(false)
Creates an instance of a module and registers it to the ModuleManager.
static ModuleManager & Instance()
Exception is thrown if the requested module could not be created by the ModuleManager.
const ModuleParamList & getParamList() const
Return module param list.
Definition: Module.h:363
const std::string & getName() const
Returns the name of the module.
Definition: Module.h:187
const std::string & getType() const
Returns the type of the module (i.e.
Definition: Module.cc:41
unsigned int m_propertyFlags
The properties of the module as bitwise or (with |) of EModulePropFlags.
Definition: Module.h:512
LogConfig m_logConfig
The log system configuration of the module.
Definition: Module.h:514
std::vector< ModuleCondition > m_conditions
Module condition, only non-null if set.
Definition: Module.h:521
std::string m_package
Package this module is found in (may be empty).
Definition: Module.h:510
std::shared_ptr< Module > ModulePtr
Defines a pointer to a module object as a boost shared pointer.
Definition: Module.h:43

◆ createRelationLookup()

void createRelationLookup ( const RelationArray relation,
RelationLookup lookup,
size_t  digits 
)
private

Create lookup maps for Relations We do not use the RelationIndex as we know much more about the relations: we know the relations get created in a consolidated way by the Digitizer and that they already point in the right direction so we only need to speed up finding the correct element.

We just create a vector from digit id to relationElement pointer for fast lookup

Parameters
relationRelationArray to build the lookuptable for
lookupLookuptable to fill
digitsnumber of digits in this event

Definition at line 273 of file PXDClusterizerModule.cc.

274{
275 lookup.clear();
276 //If we don't have a relation we don't build a lookuptable
277 if (!relation) return;
278 //Resize to number of digits and set all values
279 lookup.resize(digits);
280 for (const RelationElement& element : relation) {
281 lookup[element.getFromIndex()] = &element;
282 }
283}
Class to store a single element of a relation.

◆ def_beginRun()

virtual void def_beginRun ( )
inlineprotectedvirtualinherited

Wrapper method for the virtual function beginRun() that has the implementation to be used in a call from Python.

Reimplemented in PyModule.

Definition at line 426 of file Module.h.

426{ beginRun(); }
virtual void beginRun()
Called when entering a new run.
Definition: Module.h:147

◆ def_endRun()

virtual void def_endRun ( )
inlineprotectedvirtualinherited

This method can receive that the current run ends as a call from the Python side.

For regular C++-Modules that forwards the call to the regular endRun() method.

Reimplemented in PyModule.

Definition at line 439 of file Module.h.

439{ endRun(); }
virtual void endRun()
This method is called if the current run ends.
Definition: Module.h:166

◆ def_event()

virtual void def_event ( )
inlineprotectedvirtualinherited

Wrapper method for the virtual function event() that has the implementation to be used in a call from Python.

Reimplemented in PyModule.

Definition at line 432 of file Module.h.

432{ event(); }
virtual void event()
This method is the core of the module.
Definition: Module.h:157

◆ def_initialize()

virtual void def_initialize ( )
inlineprotectedvirtualinherited

Wrappers to make the methods without "def_" prefix callable from Python.

Overridden in PyModule. Wrapper method for the virtual function initialize() that has the implementation to be used in a call from Python.

Reimplemented in PyModule.

Definition at line 420 of file Module.h.

420{ initialize(); }
virtual void initialize()
Initialize the Module.
Definition: Module.h:109

◆ def_terminate()

virtual void def_terminate ( )
inlineprotectedvirtualinherited

Wrapper method for the virtual function terminate() that has the implementation to be used in a call from Python.

Reimplemented in PyModule.

Definition at line 445 of file Module.h.

445{ terminate(); }
virtual void terminate()
This method is called at the end of the event processing.
Definition: Module.h:176

◆ endRun()

virtual void endRun ( void  )
inlinevirtualinherited

This method is called if the current run ends.

Use this method to store information, which should be aggregated over one run.

This method can be implemented by subclasses.

Reimplemented in BeamabortModule, BgoModule, CaveModule, ClawModule, CLAWSModule, DosiModule, FANGSModule, He3tubeModule, MicrotpcModule, Ph1bpipeModule, Ph1sustrModule, PindiodeModule, PlumeModule, QcsmonitorModule, SrsensorModule, GetEventFromSocketModule, CalibrationCollectorModule, AlignDQMModule, CosmicsAlignmentValidationModule, CurlTaggerModule, LowEnergyPi0IdentificationExpertModule, LowEnergyPi0VetoExpertModule, arichBtestModule, ARICHDQMModule, B2BIIMCParticlesMonitorModule, B2BIIConvertMdstModule, B2BIIMdstInputModule, BelleMCOutputModule, BeamBkgGeneratorModule, BeamBkgHitRateMonitorModule, BeamBkgMixerModule, BeamBkgTagSetterModule, BGOverlayInputModule, AnalysisPhase1StudyModule, NtuplePhase1_v6Module, ReprocessorModule, BeamabortStudyModule, BeamDigitizerModule, BgoDigitizerModule, BgoStudyModule, ClawDigitizerModule, ClawStudyModule, ClawsDigitizerModule, ClawsStudyModule, CsiDigitizer_v2Module, CsIDigitizerModule, CsiModule, CsiStudy_v2Module, CsIStudyModule, DosiDigitizerModule, DosiStudyModule, FANGSDigitizerModule, FANGSStudyModule, He3DigitizerModule, He3tubeStudyModule, MicrotpcStudyModule, TpcDigitizerModule, TPCStudyModule, PinDigitizerModule, PindiodeStudyModule, PlumeDigitizerModule, QcsmonitorDigitizerModule, QcsmonitorStudyModule, CDCCosmicAnalysisModule, CDCCRTestModule, cdcDQM7Module, CDCDQMModule, CDCPackerModule, CDCRecoTrackFilterModule, CDCUnpackerModule, DAQPerfModule, RxSocketModule, TxSocketModule, DqmHistoManagerModule, MonitorDataModule, TrackAnaModule, Ds2SampleModule, ReceiveEventModule, HLTDQM2ZMQModule, HLTDs2ZMQModule, ElapsedTimeModule, DeSerializerPXDModule, GenRawSendModule, Root2RawModule, SerializerModule, CertifyParallelModule, Ds2RawModule, Ds2RbufModule, EvReductionModule, FastRbuf2DsModule, Raw2DsModule, RawInputModule, Rbuf2DsModule, Rbuf2RbufModule, Ds2RawFileModule, PartialSeqRootReaderModule, SeqRootMergerModule, StorageDeserializerModule, StorageRootOutputModule, StorageSerializerModule, PhysicsObjectsDQMModule, PhysicsObjectsMiraBelleBhabhaModule, PhysicsObjectsMiraBelleDst2Module, PhysicsObjectsMiraBelleDstModule, PhysicsObjectsMiraBelleHadronModule, PhysicsObjectsMiraBelleModule, ECLBackgroundModule, ECLChargedPIDModule, ECLChargedPIDDataAnalysisModule, ECLChargedPIDDataAnalysisValidationModule, ECLClusterPSDModule, ECLCovarianceMatrixModule, ECLCRFinderModule, ECLDataAnalysisModule, ECLDigitCalibratorModule, ECLDigitizerModule, ECLDigitizerPureCsIModule, EclDisplayModule, ECLDQMModule, ECLDQMEXTENDEDModule, ECLDQMOutOfTimeDigitsModule, ECLFinalizerModule, ECLHitDebugModule, ECLLocalMaximumFinderModule, ECLLocalRunCalibratorModule, ECLLOMModule, ECLPackerModule, ECLShowerCorrectorModule, ECLShowerShapeModule, ECLSplitterN1Module, ECLSplitterN2Module, ECLUnpackerModule, ECLWaveformFitModule, HistoModule, SubEventModule, SwitchDataStoreModule, EventInfoPrinterModule, RandomBarrierModule, HistoManagerModule, StatisticsSummaryModule, SeqRootInputModule, SeqRootOutputModule, RxModule, TxModule, ZMQTxInputModule, ZMQTxWorkerModule, EvtGenDecayModule, OverrideGenerationFlagsModule, BKLMAnaModule, BKLMDigitAnalyzerModule, BKLMSimHistogrammerModule, BKLMTrackingModule, EKLMDataCheckerModule, KLMClusterEfficiencyModule, KLMClustersReconstructorModule, KLMDigitizerModule, KLMDQMModule, KLMDQM2Module, KLMPackerModule, KLMReconstructorModule, KLMScintillatorSimulatorModule, KLMUnpackerModule, AWESOMEBasicModule, PXDBackgroundModule, PXDClustersFromTracksModule, PXDPerformanceModule, Convert2RawDetModule, PrintDataModule, PrintEventRateModule, Root2BinaryModule, CDCDedxDQMModule, CDCDedxValidationModule, EventT0ValidationModule, DataWriterModule, KlongValidationModule, KLMMuonIDDNNExpertModule, FullSimModule, SVDBackgroundModule, SVDClusterCalibrationsMonitorModule, SVDHotStripFinderModule, SVDLatencyCalibrationModule, SVDLocalCalibrationsMonitorModule, SVDPositionErrorScaleFactorImporterModule, SVDTimeCalibrationsMonitorModule, svdDumpModule, SVDPackerModule, SVDB4CommissioningPlotsModule, SVDClusterEvaluationModule, SVDClusterEvaluationTrueInfoModule, SVDClusterFilterModule, SVDOccupancyAnalysisModule, SVDPerformanceModule, SVDShaperDigitsFromTracksModule, SVDClusterizerModule, SVDCoGTimeEstimatorModule, SVDDataFormatCheckModule, SVDRecoDigitCreatorModule, SVD3SamplesEmulatorModule, SVDTriggerQualityGeneratorModule, SVDUnpackerModule, TOPBackgroundModule, TOPChannelT0MCModule, TOPTriggerDigitizerModule, TOPDoublePulseGeneratorModule, TOPGainEfficiencyCalculatorModule, TOPLaserHitSelectorModule, TOPInterimFENtupleModule, TOPLaserCalibratorModule, TOPMCTrackMakerModule, TOPNtupleModule, TOPPackerModule, TOPRawDigitConverterModule, TOPTBCComparatorModule, TOPTimeBaseCalibratorModule, TOPUnpackerModule, TOPWaveformFeatureExtractorModule, TOPWaveformQualityPlotterModule, TOPXTalkChargeShareSetterModule, ExtModule, GenfitVisModule, MCV0MatcherModule, MCTrackCandClassifierModule, MuidModule, MCSlowPionPXDROICreatorModule, PXDROIFinderModule, SVDROIDQMModule, SVDROIFinderAnalysisModule, SVDROIFinderModule, RT2SPTCConverterModule, SPTCmomentumSeedRetrieverModule, SPTCvirtualIPRemoverModule, TrackFinderMCTruthRecoTracksModule, EffPlotsModule, HitXPModule, TrackingPerformanceEvaluationModule, V0findingPerformanceEvaluationModule, SecMapTrainerBaseModule, SecMapTrainerVXDTFModule, TrackFinderVXDAnalizerModule, VXDSimpleClusterizerModule, NoKickCutsEvalModule, SectorMapBootstrapModule, VXDTFTrainingDataCollectorModule, FindletModule< AFindlet >, FindletModule< HitBasedT0Extractor >, FindletModule< CKFToSVDSeedFindlet >, FindletModule< CKFToSVDFindlet >, FindletModule< CosmicsTrackMergerFindlet >, FindletModule< DATCONFPGAFindlet >, FindletModule< MCVXDCDCTrackMergerFindlet >, FindletModule< vxdHoughTracking::SVDHoughTracking >, FindletModule< CKFToCDCFindlet >, FindletModule< CKFToCDCFromEclFindlet >, FindletModule< CKFToPXDFindlet >, FindletModule< AsicBackgroundLibraryCreator >, FindletModule< CDCTrackingEventLevelMdstInfoFillerFindlet >, FindletModule< AxialSegmentPairCreator >, FindletModule< AxialStraightTrackFinder >, FindletModule< AxialTrackCreatorMCTruth >, FindletModule< AxialTrackCreatorSegmentHough >, FindletModule< AxialTrackFinderHough >, FindletModule< AxialTrackFinderLegendre >, FindletModule< ClusterBackgroundDetector >, FindletModule< ClusterPreparer >, FindletModule< ClusterRefiner< BridgingWireHitRelationFilter > >, FindletModule< FacetCreator >, FindletModule< HitReclaimer >, FindletModule< MonopoleAxialTrackFinderLegendre >, FindletModule< MonopoleStereoHitFinder >, FindletModule< MonopoleStereoHitFinderQuadratic >, FindletModule< SegmentCreatorFacetAutomaton >, FindletModule< SegmentCreatorMCTruth >, FindletModule< SegmentFinderFacetAutomaton >, FindletModule< SegmentFitter >, FindletModule< SegmentLinker >, FindletModule< SegmentOrienter >, FindletModule< SegmentPairCreator >, FindletModule< SegmentRejecter >, FindletModule< SegmentTrackCombiner >, FindletModule< SegmentTripleCreator >, FindletModule< StereoHitFinder >, FindletModule< SuperClusterCreator >, FindletModule< TrackCombiner >, FindletModule< TrackCreatorSegmentPairAutomaton >, FindletModule< TrackCreatorSegmentTripleAutomaton >, FindletModule< TrackCreatorSingleSegments >, FindletModule< TrackExporter >, FindletModule< TrackFinderAutomaton >, FindletModule< TrackFinderCosmics >, FindletModule< TrackFinder >, FindletModule< TrackFinderSegmentPairAutomaton >, FindletModule< TrackFinderSegmentTripleAutomaton >, FindletModule< TrackFlightTimeAdjuster >, FindletModule< TrackLinker >, FindletModule< TrackOrienter >, FindletModule< TrackQualityAsserter >, FindletModule< TrackQualityEstimator >, FindletModule< TrackRejecter >, FindletModule< WireHitBackgroundDetector >, FindletModule< WireHitCreator >, FindletModule< WireHitPreparer >, CDCTriggerNeuroDQMModule, CDCTriggerNeuroDQMOnlineModule, CDCTriggerNDFinderModule, TRGCDCModule, TRGCDCETFUnpackerModule, TRGCDCT2DDQMModule, TRGCDCT3DConverterModule, TRGCDCT3DDQMModule, TRGCDCT3DUnpackerModule, TRGCDCTSFDQMModule, TRGCDCTSFUnpackerModule, TRGCDCTSStreamModule, MCMatcherTRGECLModule, TRGECLFAMModule, TRGECLModule, TRGECLBGTCHitModule, TRGECLDQMModule, TRGECLQAMModule, TRGECLRawdataAnalysisModule, TRGECLTimingCalModule, TRGECLUnpackerModule, TRGGDLModule, TRGGDLDQMModule, TRGGDLDSTModule, TRGGDLSummaryModule, TRGGDLUnpackerModule, TRGGRLMatchModule, TRGGRLModule, TRGGRLProjectsModule, TRGGRLDQMModule, TRGGRLUnpackerModule, KLMTriggerModule, TRGTOPDQMModule, TRGTOPTRD2TTSConverterModule, TRGTOPUnpackerModule, TRGTOPUnpackerWaveformModule, TRGTOPWaveformPlotterModule, TRGRAWDATAModule, DQMHistAnalysisARICHModule, DQMHistAnalysisARICHMonObjModule, DQMHistAnalysisCDCDedxModule, DQMHistAnalysisCDCEpicsModule, DQMHistAnalysisCDCMonObjModule, DQMHistAnalysisECLModule, DQMHistAnalysisECLConnectedRegionsModule, DQMHistAnalysisECLOutOfTimeDigitsModule, DQMHistAnalysisECLShapersModule, DQMHistAnalysisECLSummaryModule, DQMHistAnalysisEpicsExampleModule, DQMHistAnalysisExampleModule, DQMHistAnalysisExampleFlagsModule, DQMHistAnalysisHLTMonObjModule, DQMHistAnalysisInput2Module, DQMHistAnalysisInputPVSrvModule, DQMHistAnalysisInputTestModule, DQMHistAnalysisKLMModule, DQMHistAnalysisKLM2Module, DQMHistAnalysisMiraBelleModule, DQMHistAnalysisMonObjModule, DQMHistAnalysisOutputFileModule, DQMHistAnalysisOutputMonObjModule, DQMHistAnalysisOutputRelayMsgModule, DQMHistAnalysisPXDFitsModule, DQMHistAnalysisSVDDoseModule, DQMHistAnalysisSVDEfficiencyModule, DQMHistAnalysisSVDGeneralModule, DQMHistAnalysisSVDOnMiraBelleModule, DQMHistAnalysisTOPModule, DQMHistAnalysisTRGECLModule, DQMHistAnalysisTRGGDLModule, DQMHistComparitorModule, DQMHistDeltaHistoModule, DQMHistReferenceModule, DQMHistSnapshotsModule, PyModule, SVDUnpackerDQMModule, TrackSetEvaluatorHopfieldNNDEVModule, vxdDigitMaskingModule, DQMHistAnalysisDeltaEpicsMonObjExampleModule, DQMHistAnalysisDeltaTestModule, DQMHistAnalysisEpicsOutputModule, DQMHistAnalysisPhysicsModule, DQMHistAnalysisPXDChargeModule, DQMHistAnalysisPXDTrackChargeModule, DQMHistAnalysisRooFitExampleModule, DQMHistAnalysisTRGModule, and DQMHistOutputToEPICSModule.

Definition at line 166 of file Module.h.

166{};

◆ evalCondition()

bool evalCondition ( ) const
inherited

If at least one condition was set, it is evaluated and true returned if at least one condition returns true.

If no condition or result value was defined, the method returns false. Otherwise, the condition is evaluated and true returned, if at least one condition returns true. To speed up the evaluation, the condition strings were already parsed in the method if_value().

Returns
True if at least one condition and return value exists and at least one condition expression was evaluated to true.

Definition at line 96 of file Module.cc.

97{
98 if (m_conditions.empty()) return false;
99
100 //okay, a condition was set for this Module...
101 if (!m_hasReturnValue) {
102 B2FATAL("A condition was set for '" << getName() << "', but the module did not set a return value!");
103 }
104
105 for (const auto& condition : m_conditions) {
106 if (condition.evaluate(m_returnValue)) {
107 return true;
108 }
109 }
110 return false;
111}
int m_returnValue
The return value.
Definition: Module.h:519
bool m_hasReturnValue
True, if the return value is set.
Definition: Module.h:518

◆ event()

void event ( void  )
overridevirtual

do the clustering

Reimplemented from Module.

Definition at line 176 of file PXDClusterizerModule.cc.

177{
178 // Abort in case SVDSpacePointCreator was aborted (high occupancy events) or if both VXDTF2 and SVDCKF were aborted
179 // as we do not add PXD hits to CDC standalone tracks, so we don't need to run the PXDClusterizer.
180 // This veto can be overwritten by setting m_createPXDClustersForAbortedTrackingEvents to true to create them regardless.
181 if (m_eventLevelTrackingInfo.isValid()) {
183 (m_eventLevelTrackingInfo->hasSVDSpacePointCreatorAbortionFlag() or
184 (m_eventLevelTrackingInfo->hasSVDCKFAbortionFlag() and m_eventLevelTrackingInfo->hasVXDTF2AbortionFlag()))) {
185 return;
186 }
187 }
188
189 const StoreArray<MCParticle> storeMCParticles(m_storeMCParticlesName);
190 const StoreArray<PXDTrueHit> storeTrueHits(m_storeTrueHitsName);
191 const StoreArray<PXDDigit> storeDigits(m_storeDigitsName);
193
194 storeClusters.clear();
195
196 RelationArray relClusterMCParticle(storeClusters, storeMCParticles,
198 if (relClusterMCParticle) relClusterMCParticle.clear();
199
200 RelationArray relClusterDigit(storeClusters, storeDigits,
202 if (relClusterDigit) relClusterDigit.clear();
203
204 RelationArray relClusterTrueHit(storeClusters, storeTrueHits,
206 if (relClusterTrueHit) relClusterTrueHit.clear();
207
208 int nPixels = storeDigits.getEntries();
209 if (nPixels == 0)
210 return;
211
212 //Build lookup tables for relations
213 RelationArray relDigitMCParticle(storeDigits, storeMCParticles, m_relDigitMCParticleName);
214 RelationArray relDigitTrueHit(storeDigits, storeTrueHits, m_relDigitTrueHitName);
215 createRelationLookup(relDigitMCParticle, m_mcRelation, storeDigits.getEntries());
216 createRelationLookup(relDigitTrueHit, m_trueRelation, storeDigits.getEntries());
217
218 m_cache->clear();
219
220 //We require all pixels are already sorted and directly cluster them. Once
221 //the sensorID changes, we write out all existing clusters and continue.
222 VxdID sensorID(0);
223 //To check sorting
224 Pixel lastPixel;
225 for (int i = 0; i < nPixels; i++) {
226 const PXDDigit* const storeDigit = storeDigits[i];
227 Pixel px(storeDigit, i);
228 //New sensor, write clusters
229 if (sensorID != storeDigit->getSensorID()) {
230 writeClusters(sensorID);
231 sensorID = storeDigit->getSensorID();
232 //Load the correct noise map for the new sensor
233 m_noiseMap.setSensorID(sensorID);
234 } else if (px <= lastPixel) {
235 //Check for sorting as precaution
236 B2FATAL("Pixels are not sorted correctly, please include the "
237 "PXDDigitSorter module before running the Clusterizer or fix "
238 "the input to be ordered by v,u in ascending order");
239 }
240 //Remember last pixel to check sorting
241 lastPixel = px;
242
243 //Ignore digits with not enough signal. Has to be done after the check of
244 //the SensorID to make sure we compare to the correct noise level
245 if (!m_noiseMap(px, m_cutAdjacent)) continue;
246
247 // TODO: If we would like to cluster across dead channels we would need a
248 // sorted list of dead pixels. Assuming we have such a list m_deadChannels
249 // containing Pixel instances with all dead channels of this sensor and
250 // m_currentDeadChannel is an iterator to that list (initialized to
251 // begin(m_deadChannels) when the sensorID changes), we would do
252 //
253 // while(m_currentDeadChannel != end(m_deadChannels) && *m_currentDeadChannel < px){
254 // m_cache->findCluster(m_currentDeadChannel->getU(), m_currentDeadChannel->getV());
255 // m_currentDeadChannel++;
256 // }
257 //
258 // This would have the effect of marking the pixel address as belonging
259 // to a cluster but would not modify the clusters itself (except for
260 // possible merging of clusters) so we would end up with clusters that
261 // contain holes or are disconnected.
262
263 // Find correct cluster and add pixel to cluster
264 try {
265 m_cache->findCluster(px.getU(), px.getV()).add(px);
266 } catch (std::out_of_range& e) {
267 B2WARNING("PXD clustering: Ignoring pixel " << px.getU() << "," << px.getV() << ": " << e.what());
268 }
269 }
270 writeClusters(sensorID);
271}
The PXD digit class.
Definition: PXDDigit.h:27
VxdID getSensorID() const
Get the sensor ID.
Definition: PXDDigit.h:64
virtual void setSensorID(VxdID)
Set the sensorID currently used.
Definition: NoiseMap.h:38
NoiseMap m_noiseMap
Noise map for the currently active sensor.
StoreObjPtr< EventLevelTrackingInfo > m_eventLevelTrackingInfo
StoreObject to access the event level tracking information.
std::string m_relDigitMCParticleName
Name of the relation between PXDDigits and MCParticles.
std::string m_relClusterDigitName
Name of the relation between PXDClusters and PXDDigits.
RelationLookup m_trueRelation
Lookup table for PXDDigit->PXDTrueHit relation.
void createRelationLookup(const RelationArray &relation, RelationLookup &lookup, size_t digits)
Create lookup maps for Relations We do not use the RelationIndex as we know much more about the relat...
void writeClusters(VxdID sensorID)
Write clusters to collection.
std::string m_relDigitTrueHitName
Name of the relation between PXDDigits and PXDTrueHits.
std::string m_relClusterMCParticleName
Name of the relation between PXDClusters and MCParticles.
RelationLookup m_mcRelation
Lookup table for PXDDigit->MCParticle relation.
std::unique_ptr< ClusterCache > m_cache
cache of the last seen clusters to speed up clustering
std::string m_relClusterTrueHitName
Name of the relation between PXDClusters and PXDTrueHits.
Class to represent one pixel, used in clustering for fast access.
Definition: Pixel.h:36
Low-level class to create/modify relations between StoreArrays.
Definition: RelationArray.h:62
Accessor to arrays stored in the data store.
Definition: StoreArray.h:113
Class to uniquely identify a any structure of the PXD and SVD.
Definition: VxdID.h:33

◆ exposePythonAPI()

void exposePythonAPI ( )
staticinherited

Exposes methods of the Module class to Python.

Definition at line 325 of file Module.cc.

326{
327 // to avoid confusion between std::arg and boost::python::arg we want a shorthand namespace as well
328 namespace bp = boost::python;
329
330 docstring_options options(true, true, false); //userdef, py sigs, c++ sigs
331
332 void (Module::*setReturnValueInt)(int) = &Module::setReturnValue;
333
334 enum_<Module::EAfterConditionPath>("AfterConditionPath",
335 R"(Determines execution behaviour after a conditional path has been executed:
336
337.. attribute:: END
338
339 End processing of this path after the conditional path. (this is the default for if_value() etc.)
340
341.. attribute:: CONTINUE
342
343 After the conditional path, resume execution after this module.)")
344 .value("END", Module::EAfterConditionPath::c_End)
345 .value("CONTINUE", Module::EAfterConditionPath::c_Continue)
346 ;
347
348 /* Do not change the names of >, <, ... we use them to serialize conditional pathes */
349 enum_<Belle2::ModuleCondition::EConditionOperators>("ConditionOperator")
356 ;
357
358 enum_<Module::EModulePropFlags>("ModulePropFlags",
359 R"(Flags to indicate certain low-level features of modules, see :func:`Module.set_property_flags()`, :func:`Module.has_properties()`. Most useful flags are:
360
361.. attribute:: PARALLELPROCESSINGCERTIFIED
362
363 This module can be run in parallel processing mode safely (All I/O must be done through the data store, in particular, the module must not write any files.)
364
365.. attribute:: HISTOGRAMMANAGER
366
367 This module is used to manage histograms accumulated by other modules
368
369.. attribute:: TERMINATEINALLPROCESSES
370
371 When using parallel processing, call this module's terminate() function in all processes. This will also ensure that there is exactly one process (single-core if no parallel modules found) or at least one input, one main and one output process.
372)")
373 .value("INPUT", Module::EModulePropFlags::c_Input)
374 .value("OUTPUT", Module::EModulePropFlags::c_Output)
375 .value("PARALLELPROCESSINGCERTIFIED", Module::EModulePropFlags::c_ParallelProcessingCertified)
376 .value("HISTOGRAMMANAGER", Module::EModulePropFlags::c_HistogramManager)
377 .value("INTERNALSERIALIZER", Module::EModulePropFlags::c_InternalSerializer)
378 .value("TERMINATEINALLPROCESSES", Module::EModulePropFlags::c_TerminateInAllProcesses)
379 ;
380
381 //Python class definition
382 class_<Module, PyModule> module("Module", R"(
383Base class for Modules.
384
385A module is the smallest building block of the framework.
386A typical event processing chain consists of a Path containing
387modules. By inheriting from this base class, various types of
388modules can be created. To use a module, please refer to
389:func:`Path.add_module()`. A list of modules is available by running
390``basf2 -m`` or ``basf2 -m package``, detailed information on parameters is
391given by e.g. ``basf2 -m RootInput``.
392
393The 'Module Development' section in the manual provides detailed information
394on how to create modules, setting parameters, or using return values/conditions:
395https://confluence.desy.de/display/BI/Software+Basf2manual#Module_Development
396
397)");
398 module
399 .def("__str__", &Module::getPathString)
400 .def("name", &Module::getName, return_value_policy<copy_const_reference>(),
401 "Returns the name of the module. Can be changed via :func:`set_name() <Module.set_name()>`, use :func:`type() <Module.type()>` for identifying a particular module class.")
402 .def("type", &Module::getType, return_value_policy<copy_const_reference>(),
403 "Returns the type of the module (i.e. class name minus 'Module')")
404 .def("set_name", &Module::setName, args("name"), R"(
405Set custom name, e.g. to distinguish multiple modules of the same type.
406
407>>> path.add_module('EventInfoSetter')
408>>> ro = path.add_module('RootOutput', branchNames=['EventMetaData'])
409>>> ro.set_name('RootOutput_metadata_only')
410>>> print(path)
411[EventInfoSetter -> RootOutput_metadata_only]
412
413)")
414 .def("description", &Module::getDescription, return_value_policy<copy_const_reference>(),
415 "Returns the description of this module.")
416 .def("package", &Module::getPackage, return_value_policy<copy_const_reference>(),
417 "Returns the package this module belongs to.")
418 .def("available_params", &_getParamInfoListPython,
419 "Return list of all module parameters as `ModuleParamInfo` instances")
420 .def("has_properties", &Module::hasProperties, (bp::arg("properties")),
421 R"DOCSTRING(Allows to check if the module has the given properties out of `ModulePropFlags` set.
422
423>>> if module.has_properties(ModulePropFlags.PARALLELPROCESSINGCERTIFIED):
424>>> ...
425
426Parameters:
427 properties (int): bitmask of `ModulePropFlags` to check for.
428)DOCSTRING")
429 .def("set_property_flags", &Module::setPropertyFlags, args("property_mask"),
430 "Set module properties in the form of an OR combination of `ModulePropFlags`.");
431 {
432 // python signature is too crowded, make ourselves
433 docstring_options subOptions(true, false, false); //userdef, py sigs, c++ sigs
434 module
435 .def("if_value", &Module::if_value,
436 (bp::arg("expression"), bp::arg("condition_path"), bp::arg("after_condition_path")= Module::EAfterConditionPath::c_End),
437 R"DOCSTRING(if_value(expression, condition_path, after_condition_path=AfterConditionPath.END)
438
439Sets a conditional sub path which will be executed after this
440module if the return value set in the module passes the given ``expression``.
441
442Modules can define a return value (int or bool) using ``setReturnValue()``,
443which can be used in the steering file to split the Path based on this value, for example
444
445>>> module_with_condition.if_value("<1", another_path)
446
447In case the return value of the ``module_with_condition`` for a given event is
448less than 1, the execution will be diverted into ``another_path`` for this event.
449
450You could for example set a special return value if an error occurs, and divert
451the execution into a path containing :b2:mod:`RootOutput` if it is found;
452saving only the data producing/produced by the error.
453
454After a conditional path has executed, basf2 will by default stop processing
455the path for this event. This behaviour can be changed by setting the
456``after_condition_path`` argument.
457
458Parameters:
459 expression (str): Expression to determine if the conditional path should be executed.
460 This should be one of the comparison operators ``<``, ``>``, ``<=``,
461 ``>=``, ``==``, or ``!=`` followed by a numerical value for the return value
462 condition_path (Path): path to execute in case the expression is fulfilled
463 after_condition_path (AfterConditionPath): What to do once the ``condition_path`` has been executed.
464)DOCSTRING")
465 .def("if_false", &Module::if_false,
466 (bp::arg("condition_path"), bp::arg("after_condition_path")= Module::EAfterConditionPath::c_End),
467 R"DOC(if_false(condition_path, after_condition_path=AfterConditionPath.END)
468
469Sets a conditional sub path which will be executed after this module if
470the return value of the module evaluates to False. This is equivalent to
471calling `if_value` with ``expression=\"<1\"``)DOC")
472 .def("if_true", &Module::if_true,
473 (bp::arg("condition_path"), bp::arg("after_condition_path")= Module::EAfterConditionPath::c_End),
474 R"DOC(if_true(condition_path, after_condition_path=AfterConditionPath.END)
475
476Sets a conditional sub path which will be executed after this module if
477the return value of the module evaluates to True. It is equivalent to
478calling `if_value` with ``expression=\">=1\"``)DOC");
479 }
480 module
481 .def("has_condition", &Module::hasCondition,
482 "Return true if a conditional path has been set for this module "
483 "using `if_value`, `if_true` or `if_false`")
484 .def("get_all_condition_paths", &_getAllConditionPathsPython,
485 "Return a list of all conditional paths set for this module using "
486 "`if_value`, `if_true` or `if_false`")
487 .def("get_all_conditions", &_getAllConditionsPython,
488 "Return a list of all conditional path expressions set for this module using "
489 "`if_value`, `if_true` or `if_false`")
490 .add_property("logging", make_function(&Module::getLogConfig, return_value_policy<reference_existing_object>()),
@ c_GE
Greater or equal than: ">=".
@ c_SE
Smaller or equal than: "<=".
@ c_GT
Greater than: ">"
@ c_NE
Not equal: "!=".
@ c_EQ
Equal: "=" or "=="
@ c_ST
Smaller than: "<"
Base class for Modules.
Definition: Module.h:72
LogConfig & getLogConfig()
Returns the log system configuration.
Definition: Module.h:225
void if_value(const std::string &expression, const std::shared_ptr< Path > &path, EAfterConditionPath afterConditionPath=EAfterConditionPath::c_End)
Add a condition to the module.
Definition: Module.cc:79
void if_true(const std::shared_ptr< Path > &path, EAfterConditionPath afterConditionPath=EAfterConditionPath::c_End)
A simplified version to set the condition of the module.
Definition: Module.cc:90
void setReturnValue(int value)
Sets the return value for this module as integer.
Definition: Module.cc:220
void setLogConfig(const LogConfig &logConfig)
Set the log system configuration.
Definition: Module.h:230
const std::string & getDescription() const
Returns the description of the module.
Definition: Module.h:202
void if_false(const std::shared_ptr< Path > &path, EAfterConditionPath afterConditionPath=EAfterConditionPath::c_End)
A simplified version to add a condition to the module.
Definition: Module.cc:85
bool hasCondition() const
Returns true if at least one condition was set for the module.
Definition: Module.h:311
const std::string & getPackage() const
Returns the package this module is in.
Definition: Module.h:197
void setName(const std::string &name)
Set the name of the module.
Definition: Module.h:214
bool hasProperties(unsigned int propertyFlags) const
Returns true if all specified property flags are available in this module.
Definition: Module.cc:160
std::string getPathString() const override
return the module name.
Definition: Module.cc:192

◆ fillRelationMap()

void fillRelationMap ( const RelationLookup lookup,
std::map< unsigned int, float > &  relation,
unsigned int  index 
)
private

Add the relation from a given PXDDigit index to a map.

Parameters
lookupLookuptable to use for the relation
relationmap to add the entries to
indexindex of the PXDDigit

Definition at line 285 of file PXDClusterizerModule.cc.

287{
288 //If the lookup table is not empty and the element is set
289 if (!lookup.empty() && lookup[index]) {
290 const RelationElement& element = *lookup[index];
291 const unsigned int size = element.getSize();
292 //Add all Relations to the map
293 for (unsigned int i = 0; i < size; ++i) {
294 //negative weights are from ignored particles, we don't like them and
295 //thus ignore them :D
296 if (element.getWeight(i) < 0) continue;
297 relation[element.getToIndex(i)] += element.getWeight(i);
298 }
299 }
300}

◆ getAfterConditionPath()

Module::EAfterConditionPath getAfterConditionPath ( ) const
inherited

What to do after the conditional path is finished.

(defaults to c_End if no condition is set)

Definition at line 133 of file Module.cc.

134{
135 if (m_conditions.empty()) return EAfterConditionPath::c_End;
136
137 //okay, a condition was set for this Module...
138 if (!m_hasReturnValue) {
139 B2FATAL("A condition was set for '" << getName() << "', but the module did not set a return value!");
140 }
141
142 for (const auto& condition : m_conditions) {
143 if (condition.evaluate(m_returnValue)) {
144 return condition.getAfterConditionPath();
145 }
146 }
147
148 return EAfterConditionPath::c_End;
149}

◆ getAllConditionPaths()

std::vector< std::shared_ptr< Path > > getAllConditionPaths ( ) const
inherited

Return all condition paths currently set (no matter if the condition is true or not).

Definition at line 150 of file Module.cc.

151{
152 std::vector<std::shared_ptr<Path>> allConditionPaths;
153 for (const auto& condition : m_conditions) {
154 allConditionPaths.push_back(condition.getPath());
155 }
156
157 return allConditionPaths;
158}

◆ getAllConditions()

const std::vector< ModuleCondition > & getAllConditions ( ) const
inlineinherited

Return all set conditions for this module.

Definition at line 324 of file Module.h.

325 {
326 return m_conditions;
327 }

◆ getCondition()

const ModuleCondition * getCondition ( ) const
inlineinherited

Return a pointer to the first condition (or nullptr, if none was set)

Definition at line 314 of file Module.h.

315 {
316 if (m_conditions.empty()) {
317 return nullptr;
318 } else {
319 return &m_conditions.front();
320 }
321 }

◆ getConditionPath()

std::shared_ptr< Path > getConditionPath ( ) const
inherited

Returns the path of the last true condition (if there is at least one, else reaturn a null pointer).


Definition at line 113 of file Module.cc.

114{
115 PathPtr p;
116 if (m_conditions.empty()) return p;
117
118 //okay, a condition was set for this Module...
119 if (!m_hasReturnValue) {
120 B2FATAL("A condition was set for '" << getName() << "', but the module did not set a return value!");
121 }
122
123 for (const auto& condition : m_conditions) {
124 if (condition.evaluate(m_returnValue)) {
125 return condition.getPath();
126 }
127 }
128
129 // if none of the conditions were true, return a null pointer.
130 return p;
131}
std::shared_ptr< Path > PathPtr
Defines a pointer to a path object as a boost shared pointer.
Definition: Path.h:35

◆ getDescription()

const std::string & getDescription ( ) const
inlineinherited

Returns the description of the module.

Definition at line 202 of file Module.h.

202{return m_description;}
std::string m_description
The description of the module.
Definition: Module.h:511

◆ getFileNames()

virtual std::vector< std::string > getFileNames ( bool  outputFiles)
inlinevirtualinherited

Return a list of output filenames for this modules.

This will be called when basf2 is run with "--dry-run" if the module has set either the c_Input or c_Output properties.

If the parameter outputFiles is false (for modules with c_Input) the list of input filenames should be returned (if any). If outputFiles is true (for modules with c_Output) the list of output files should be returned (if any).

If a module has sat both properties this member is called twice, once for each property.

The module should return the actual list of requested input or produced output filenames (including handling of input/output overrides) so that the grid system can handle input/output files correctly.

This function should return the same value when called multiple times. This is especially important when taking the input/output overrides from Environment as they get consumed when obtained so the finalized list of output files should be stored for subsequent calls.

Reimplemented in RootInputModule, StorageRootOutputModule, and RootOutputModule.

Definition at line 134 of file Module.h.

135 {
136 return std::vector<std::string>();
137 }

◆ getLogConfig()

LogConfig & getLogConfig ( )
inlineinherited

Returns the log system configuration.

Definition at line 225 of file Module.h.

225{return m_logConfig;}

◆ getModules()

std::list< ModulePtr > getModules ( ) const
inlineoverrideprivatevirtualinherited

no submodules, return empty list

Implements PathElement.

Definition at line 506 of file Module.h.

506{ return std::list<ModulePtr>(); }

◆ getName()

const std::string & getName ( ) const
inlineinherited

Returns the name of the module.

This can be changed via e.g. set_name() in the steering file to give more useful names if there is more than one module of the same type.

For identifying the type of a module, using getType() (or type() in Python) is recommended.

Definition at line 187 of file Module.h.

187{return m_name;}
std::string m_name
The name of the module, saved as a string (user-modifiable)
Definition: Module.h:508

◆ getPackage()

const std::string & getPackage ( ) const
inlineinherited

Returns the package this module is in.

Definition at line 197 of file Module.h.

197{return m_package;}

◆ getParamInfoListPython()

std::shared_ptr< boost::python::list > getParamInfoListPython ( ) const
inherited

Returns a python list of all parameters.

Each item in the list consists of the name of the parameter, a string describing its type, a python list of all default values and the description of the parameter.

Returns
A python list containing the parameters of this parameter list.

Definition at line 279 of file Module.cc.

280{
282}
std::shared_ptr< boost::python::list > getParamInfoListPython() const
Returns a python list of all parameters.
ModuleParamList m_moduleParamList
List storing and managing all parameter of the module.
Definition: Module.h:516

◆ getParamList()

const ModuleParamList & getParamList ( ) const
inlineinherited

Return module param list.

Definition at line 363 of file Module.h.

363{ return m_moduleParamList; }

◆ getPathString()

std::string getPathString ( ) const
overrideprivatevirtualinherited

return the module name.

Implements PathElement.

Definition at line 192 of file Module.cc.

193{
194
195 std::string output = getName();
196
197 for (const auto& condition : m_conditions) {
198 output += condition.getString();
199 }
200
201 return output;
202}

◆ getReturnValue()

int getReturnValue ( ) const
inlineinherited

Return the return value set by this module.

This value is only meaningful if hasReturnValue() is true

Definition at line 381 of file Module.h.

381{ return m_returnValue; }

◆ getType()

const std::string & getType ( ) const
inherited

Returns the type of the module (i.e.

class name minus 'Module')

Definition at line 41 of file Module.cc.

42{
43 if (m_type.empty())
44 B2FATAL("Module type not set for " << getName());
45 return m_type;
46}
std::string m_type
The type of the module, saved as a string.
Definition: Module.h:509

◆ hasCondition()

bool hasCondition ( ) const
inlineinherited

Returns true if at least one condition was set for the module.

Definition at line 311 of file Module.h.

311{ return not m_conditions.empty(); };

◆ hasProperties()

bool hasProperties ( unsigned int  propertyFlags) const
inherited

Returns true if all specified property flags are available in this module.

Parameters
propertyFlagsOred EModulePropFlags which should be compared with the module flags.

Definition at line 160 of file Module.cc.

161{
162 return (propertyFlags & m_propertyFlags) == propertyFlags;
163}

◆ hasReturnValue()

bool hasReturnValue ( ) const
inlineinherited

Return true if this module has a valid return value set.

Definition at line 378 of file Module.h.

378{ return m_hasReturnValue; }

◆ hasUnsetForcedParams()

bool hasUnsetForcedParams ( ) const
inherited

Returns true and prints error message if the module has unset parameters which the user has to set in the steering file.

Definition at line 166 of file Module.cc.

167{
169 std::string allMissing = "";
170 for (const auto& s : missing)
171 allMissing += s + " ";
172 if (!missing.empty())
173 B2ERROR("The following required parameters of Module '" << getName() << "' were not specified: " << allMissing <<
174 "\nPlease add them to your steering file.");
175 return !missing.empty();
176}
std::vector< std::string > getUnsetForcedParams() const
Returns list of unset parameters (if they are required to have a value.

◆ if_false()

void if_false ( const std::shared_ptr< Path > &  path,
EAfterConditionPath  afterConditionPath = EAfterConditionPath::c_End 
)
inherited

A simplified version to add a condition to the module.

Please note that successive calls of this function will add more than one condition to the module. If more than one condition results in true, only the last of them will be used.

Please be careful: Avoid creating cyclic paths, e.g. by linking a condition to a path which is processed before the path where this module is located in.

It is equivalent to the if_value() method, using the expression "<1". This method is meant to be used together with the setReturnValue(bool value) method.

Parameters
pathShared pointer to the Path which will be executed if the return value is false.
afterConditionPathWhat to do after executing 'path'.

Definition at line 85 of file Module.cc.

86{
87 if_value("<1", path, afterConditionPath);
88}

◆ if_true()

void if_true ( const std::shared_ptr< Path > &  path,
EAfterConditionPath  afterConditionPath = EAfterConditionPath::c_End 
)
inherited

A simplified version to set the condition of the module.

Please note that successive calls of this function will add more than one condition to the module. If more than one condition results in true, only the last of them will be used.

Please be careful: Avoid creating cyclic paths, e.g. by linking a condition to a path which is processed before the path where this module is located in.

It is equivalent to the if_value() method, using the expression ">=1". This method is meant to be used together with the setReturnValue(bool value) method.

Parameters
pathShared pointer to the Path which will be executed if the return value is true.
afterConditionPathWhat to do after executing 'path'.

Definition at line 90 of file Module.cc.

91{
92 if_value(">=1", path, afterConditionPath);
93}

◆ if_value()

void if_value ( const std::string &  expression,
const std::shared_ptr< Path > &  path,
EAfterConditionPath  afterConditionPath = EAfterConditionPath::c_End 
)
inherited

Add a condition to the module.

Please note that successive calls of this function will add more than one condition to the module. If more than one condition results in true, only the last of them will be used.

See https://confluence.desy.de/display/BI/Software+ModCondTut or ModuleCondition for a description of the syntax.

Please be careful: Avoid creating cyclic paths, e.g. by linking a condition to a path which is processed before the path where this module is located in.

Parameters
expressionThe expression of the condition.
pathShared pointer to the Path which will be executed if the condition is evaluated to true.
afterConditionPathWhat to do after executing 'path'.

Definition at line 79 of file Module.cc.

80{
81 m_conditions.emplace_back(expression, path, afterConditionPath);
82}

◆ initialize()

void initialize ( void  )
overridevirtual

Initialize the module.

Reimplemented from Module.

Definition at line 80 of file PXDClusterizerModule.cc.

81{
82 //Register collections
87
88 storeClusters.registerInDataStore(DataStore::c_ErrorIfAlreadyRegistered);
89 storeDigits.isRequired();
90 storeTrueHits.isOptional();
91 storeMCParticles.isOptional();
92
93 RelationArray relClusterDigits(storeClusters, storeDigits);
94 RelationArray relClusterTrueHits(storeClusters, storeTrueHits);
95 RelationArray relClusterMCParticles(storeClusters, storeMCParticles);
96 RelationArray relDigitMCParticles(storeDigits, storeMCParticles);
97 RelationArray relDigitTrueHits(storeDigits, storeTrueHits);
98
99 relClusterDigits.registerInDataStore();
100 //Relations to Simulation objects are only needed if the parent one already
101 //exists
102 if (relDigitTrueHits.isOptional()) {
103 relClusterTrueHits.registerInDataStore();
104 }
105 if (relDigitMCParticles.isOptional()) {
106 relClusterMCParticles.registerInDataStore();
107 }
108
109 //Now save all names to speed creation later, mainly if they had default names
110 m_storeClustersName = storeClusters.getName();
111 m_storeDigitsName = storeDigits.getName();
112 m_storeTrueHitsName = storeTrueHits.getName();
113 m_storeMCParticlesName = storeMCParticles.getName();
114
115 m_relClusterDigitName = relClusterDigits.getName();
116 m_relClusterTrueHitName = relClusterTrueHits.getName();
117 m_relClusterMCParticleName = relClusterMCParticles.getName();
118 m_relDigitTrueHitName = relDigitTrueHits.getName();
119 m_relDigitMCParticleName = relDigitMCParticles.getName();
120
121 B2DEBUG(20,
122 "PXDClusterizer Parameters (in default system units, *=cannot be set directly):");
123 B2DEBUG(20, " --> ElectronicNoise: " << m_elNoise);
124 B2DEBUG(20, " --> NoiseSN: " << m_cutAdjacent);
125 B2DEBUG(20, " --> SeedSN: " << m_cutSeed);
126 B2DEBUG(20, " --> ClusterSN: " << m_cutCluster);
127 B2DEBUG(20,
128 " --> MCParticles: " << DataStore::arrayName<MCParticle>(m_storeMCParticlesName));
129 B2DEBUG(20,
130 " --> Digits: " << DataStore::arrayName<PXDDigit>(m_storeDigitsName));
131 B2DEBUG(20,
132 " --> Clusters: " << DataStore::arrayName<PXDCluster>(m_storeClustersName));
133 B2DEBUG(20,
134 " --> TrueHits: " << DataStore::arrayName<PXDTrueHit>(m_storeTrueHitsName));
135 B2DEBUG(20, " --> DigitMCRel: " << m_relDigitMCParticleName);
136 B2DEBUG(20, " --> ClusterMCRel: " << m_relClusterMCParticleName);
137 B2DEBUG(20, " --> ClusterDigitRel: " << m_relClusterDigitName);
138 B2DEBUG(20, " --> DigitTrueRel: " << m_relDigitTrueHitName);
139 B2DEBUG(20, " --> ClusterTrueRel: " << m_relClusterTrueHitName);
140
141
144 if (m_clusterCacheSize > 0)
145 m_cache = std::unique_ptr<ClusterCache>(new ClusterCache(m_clusterCacheSize));
146 else
147 m_cache = std::unique_ptr<ClusterCache>(new ClusterCache());
148
149 // Cluster position error from DB
150 if (m_errorFromDB) {
151 if (!m_positionErrorUName.size() || !m_positionErrorVName.size()) {
152 B2WARNING("You chose to use cluster position erros from DB but did not provide PositionErrorUPayloadName ("
153 << m_positionErrorUName << ") and/or PositionErrorVPayloadName (" << m_positionErrorVName
154 << "). Disabling DB option.");
155 m_errorFromDB = false;
156 }
157 m_clusterPositionErrorUPar = std::make_unique<DBObjPtr<PXDClusterPositionErrorPar>>(m_positionErrorUName);
158 m_clusterPositionErrorVPar = std::make_unique<DBObjPtr<PXDClusterPositionErrorPar>>(m_positionErrorVName);
159 if (m_clusterPositionErrorUPar == nullptr || m_clusterPositionErrorVPar == nullptr) {
160 B2FATAL("DB objects for ClusterPositionError not valid");
161 }
162 }
163
164 m_eventLevelTrackingInfo.isOptional();
165
166}
@ c_ErrorIfAlreadyRegistered
If the object/array was already registered, produce an error (aborting initialisation).
Definition: DataStore.h:72
Class to remember recently assigned clusters This class will remember the current and the last pixel ...
Definition: ClusterCache.h:77
void setNoiseLevel(float noise)
Set the noise level.
Definition: NoiseMap.h:33

◆ setAbortLevel()

void setAbortLevel ( int  abortLevel)
inherited

Configure the abort log level.

Definition at line 67 of file Module.cc.

68{
69 m_logConfig.setAbortLevel(static_cast<LogConfig::ELogLevel>(abortLevel));
70}
ELogLevel
Definition of the supported log levels.
Definition: LogConfig.h:26
void setAbortLevel(ELogLevel abortLevel)
Configure the abort level.
Definition: LogConfig.h:112

◆ setDebugLevel()

void setDebugLevel ( int  debugLevel)
inherited

Configure the debug messaging level.

Definition at line 61 of file Module.cc.

62{
63 m_logConfig.setDebugLevel(debugLevel);
64}
void setDebugLevel(int debugLevel)
Configure the debug messaging level.
Definition: LogConfig.h:98

◆ setDescription()

void setDescription ( const std::string &  description)
protectedinherited

Sets the description of the module.

Parameters
descriptionA description of the module.

Definition at line 214 of file Module.cc.

215{
216 m_description = description;
217}

◆ setLogConfig()

void setLogConfig ( const LogConfig logConfig)
inlineinherited

Set the log system configuration.

Definition at line 230 of file Module.h.

230{m_logConfig = logConfig;}

◆ setLogInfo()

void setLogInfo ( int  logLevel,
unsigned int  logInfo 
)
inherited

Configure the printed log information for the given level.

Parameters
logLevelThe log level (one of LogConfig::ELogLevel)
logInfoWhat kind of info should be printed? ORed combination of LogConfig::ELogInfo flags.

Definition at line 73 of file Module.cc.

74{
75 m_logConfig.setLogInfo(static_cast<LogConfig::ELogLevel>(logLevel), logInfo);
76}
void setLogInfo(ELogLevel logLevel, unsigned int logInfo)
Configure the printed log information for the given level.
Definition: LogConfig.h:127

◆ setLogLevel()

void setLogLevel ( int  logLevel)
inherited

Configure the log level.

Definition at line 55 of file Module.cc.

56{
57 m_logConfig.setLogLevel(static_cast<LogConfig::ELogLevel>(logLevel));
58}
void setLogLevel(ELogLevel logLevel)
Configure the log level.
Definition: LogConfig.cc:25

◆ setName()

void setName ( const std::string &  name)
inlineinherited

Set the name of the module.

Note
The module name is set when using the REG_MODULE macro, but the module can be renamed before calling process() using the set_name() function in your steering file.
Parameters
nameThe name of the module

Definition at line 214 of file Module.h.

214{ m_name = name; };

◆ setParamList()

void setParamList ( const ModuleParamList params)
inlineprotectedinherited

Replace existing parameter list.

Definition at line 501 of file Module.h.

501{ m_moduleParamList = params; }

◆ setParamPython()

void setParamPython ( const std::string &  name,
const boost::python::object &  pyObj 
)
privateinherited

Implements a method for setting boost::python objects.

The method supports the following types: list, dict, int, double, string, bool The conversion of the python object to the C++ type and the final storage of the parameter value is done in the ModuleParam class.

Parameters
nameThe unique name of the parameter.
pyObjThe object which should be converted and stored as the parameter value.

Definition at line 234 of file Module.cc.

235{
236 LogSystem& logSystem = LogSystem::Instance();
237 logSystem.updateModule(&(getLogConfig()), getName());
238 try {
240 } catch (std::runtime_error& e) {
241 throw std::runtime_error("Cannot set parameter '" + name + "' for module '"
242 + m_name + "': " + e.what());
243 }
244
245 logSystem.updateModule(nullptr);
246}
Class for logging debug, info and error messages.
Definition: LogSystem.h:46
void updateModule(const LogConfig *moduleLogConfig=nullptr, const std::string &moduleName="")
Sets the log configuration to the given module log configuration and sets the module name This method...
Definition: LogSystem.h:191
static LogSystem & Instance()
Static method to get a reference to the LogSystem instance.
Definition: LogSystem.cc:31
void setParamPython(const std::string &name, const PythonObject &pyObj)
Implements a method for setting boost::python objects.

◆ setParamPythonDict()

void setParamPythonDict ( const boost::python::dict &  dictionary)
privateinherited

Implements a method for reading the parameter values from a boost::python dictionary.

The key of the dictionary has to be the name of the parameter and the value has to be of one of the supported parameter types.

Parameters
dictionaryThe python dictionary from which the parameter values are read.

Definition at line 249 of file Module.cc.

250{
251
252 LogSystem& logSystem = LogSystem::Instance();
253 logSystem.updateModule(&(getLogConfig()), getName());
254
255 boost::python::list dictKeys = dictionary.keys();
256 int nKey = boost::python::len(dictKeys);
257
258 //Loop over all keys in the dictionary
259 for (int iKey = 0; iKey < nKey; ++iKey) {
260 boost::python::object currKey = dictKeys[iKey];
261 boost::python::extract<std::string> keyProxy(currKey);
262
263 if (keyProxy.check()) {
264 const boost::python::object& currValue = dictionary[currKey];
265 setParamPython(keyProxy, currValue);
266 } else {
267 B2ERROR("Setting the module parameters from a python dictionary: invalid key in dictionary!");
268 }
269 }
270
271 logSystem.updateModule(nullptr);
272}
void setParamPython(const std::string &name, const boost::python::object &pyObj)
Implements a method for setting boost::python objects.
Definition: Module.cc:234

◆ setPropertyFlags()

void setPropertyFlags ( unsigned int  propertyFlags)
inherited

Sets the flags for the module properties.

Parameters
propertyFlagsbitwise OR of EModulePropFlags

Definition at line 208 of file Module.cc.

209{
210 m_propertyFlags = propertyFlags;
211}

◆ setReturnValue() [1/2]

void setReturnValue ( bool  value)
protectedinherited

Sets the return value for this module as bool.

The bool value is saved as an integer with the convention 1 meaning true and 0 meaning false. The value can be used in the steering file to divide the analysis chain into several paths.

Parameters
valueThe value of the return value.

Definition at line 227 of file Module.cc.

228{
229 m_hasReturnValue = true;
230 m_returnValue = value;
231}

◆ setReturnValue() [2/2]

void setReturnValue ( int  value)
protectedinherited

Sets the return value for this module as integer.

The value can be used in the steering file to divide the analysis chain into several paths.

Parameters
valueThe value of the return value.

Definition at line 220 of file Module.cc.

221{
222 m_hasReturnValue = true;
223 m_returnValue = value;
224}

◆ setType()

void setType ( const std::string &  type)
protectedinherited

Set the module type.

Only for use by internal modules (which don't use the normal REG_MODULE mechanism).

Definition at line 48 of file Module.cc.

49{
50 if (!m_type.empty())
51 B2FATAL("Trying to change module type from " << m_type << " is not allowed, the value is assumed to be fixed.");
52 m_type = type;
53}

◆ terminate()

virtual void terminate ( void  )
inlinevirtualinherited

This method is called at the end of the event processing.

This method is called only once after the event processing finished. Use this method for cleaning up, closing files, etc.

This method can be implemented by subclasses.

Reimplemented in ARICHBackgroundModule, BeamabortModule, BgoModule, CaveModule, ClawModule, CLAWSModule, DosiModule, FANGSModule, He3tubeModule, MicrotpcModule, Ph1bpipeModule, Ph1sustrModule, PindiodeModule, PlumeModule, QcsmonitorModule, SrsensorModule, GetEventFromSocketModule, CalibrationCollectorModule, CosmicsAlignmentValidationModule, CurlTaggerModule, EventKinematicsModule, FlavorTaggerInfoFillerModule, LowEnergyPi0IdentificationExpertModule, LowEnergyPi0VetoExpertModule, ParticleKinematicFitterModule, ParticleLoaderModule, ParticleMassHypothesesUpdaterModule, ParticleMassUpdaterModule, ParticleMCDecayStringModule, ParticleMomentumUpdaterModule, ParticleStatsModule, ParticleWeightingLookUpCreatorModule, RemoveParticlesNotInListsModule, SkimFilterModule, TreeFitterModule, VariablesToEventBasedTreeModule, VariablesToHistogramModule, VariablesToNtupleModule, arichBtestModule, ARICHNtupleModule, arichToNtupleModule, B2BIIMCParticlesMonitorModule, B2BIIConvertMdstModule, B2BIIFixMdstModule, B2BIIMdstInputModule, BelleMCOutputModule, BeamBkgGeneratorModule, BeamBkgHitRateMonitorModule, BeamBkgMixerModule, BeamBkgTagSetterModule, BGOverlayInputModule, AnalysisPhase1StudyModule, NtuplePhase1_v6Module, ReprocessorModule, BeamabortStudyModule, BeamDigitizerModule, BgoDigitizerModule, BgoStudyModule, ClawDigitizerModule, ClawStudyModule, ClawsDigitizerModule, ClawsStudyModule, CsiDigitizer_v2Module, CsIDigitizerModule, CsiModule, CsiStudy_v2Module, CsIStudyModule, DosiDigitizerModule, DosiStudyModule, FANGSDigitizerModule, FANGSStudyModule, He3DigitizerModule, He3tubeStudyModule, MicrotpcStudyModule, TpcDigitizerModule, PinDigitizerModule, PindiodeStudyModule, PlumeDigitizerModule, QcsmonitorDigitizerModule, QcsmonitorStudyModule, CDCCosmicAnalysisModule, CDCCrossTalkAdderModule, CDCCRTestModule, CDCDigitizerModule, cdcDQM7Module, CDCDQMModule, ScanCDCGeoModule, CDCInitialT0DeterminationModule, CDCPackerModule, CDCRecoTrackFilterModule, CDCUnpackerModule, DAQPerfModule, RxSocketModule, TxSocketModule, DqmHistoManagerModule, MonitorDataModule, TrackAnaModule, Ds2SampleModule, ReceiveEventModule, HLTDQM2ZMQModule, HLTDs2ZMQModule, ElapsedTimeModule, DeSerializerModule, DeSerializerPXDModule, GenRawSendModule, Root2RawModule, SerializerModule, CertifyParallelModule, Ds2RawModule, Ds2RbufModule, EvReductionModule, FastRbuf2DsModule, Raw2DsModule, RawInputModule, Rbuf2DsModule, Rbuf2RbufModule, Ds2RawFileModule, PartialSeqRootReaderModule, SeqRootMergerModule, StorageDeserializerModule, StorageRootOutputModule, StorageSerializerModule, DisplayModule, PhysicsObjectsDQMModule, PhysicsObjectsMiraBelleBhabhaModule, PhysicsObjectsMiraBelleDst2Module, PhysicsObjectsMiraBelleDstModule, PhysicsObjectsMiraBelleHadronModule, PhysicsObjectsMiraBelleModule, ECLBackgroundModule, ECLChargedPIDModule, ECLChargedPIDDataAnalysisModule, ECLChargedPIDDataAnalysisValidationModule, ECLClusterPSDModule, ECLCompressBGOverlayModule, ECLCovarianceMatrixModule, ECLCRFinderModule, EclCovMatrixNtupleModule, ECLDataAnalysisModule, ECLDigiStudyModule, ECLDigitCalibratorModule, ECLDigitizerModule, ECLDigitizerPureCsIModule, EclDisplayModule, ECLDQMModule, ECLDQMEXTENDEDModule, ECLDQMOutOfTimeDigitsModule, ECLFillCellIdMappingModule, ECLFinalizerModule, ECLHitDebugModule, ECLLocalMaximumFinderModule, ECLLOMModule, ECLMatchingPerformanceExpertModule, ECLPackerModule, ECLShowerCorrectorModule, ECLShowerShapeModule, ECLSplitterN1Module, ECLSplitterN2Module, ECLTrackClusterMatchingModule, ECLTrackClusterMatchingParametrizationExpertModule, ECLTrackClusterMatchingPerformanceModule, ECLTRGInformationModule, ECLTrimShowersAndDigitsModule, ECLUnpackerModule, eclWaveformCalibCollectorModule, ECLWaveformFitModule, HistoModule, MergeDataStoreModule, SubEventModule, SwitchDataStoreModule, ProgressBarModule, RandomBarrierModule, HistoManagerModule, ProfileModule, RootInputModule, RootOutputModule, SeqRootInputModule, SeqRootOutputModule, AsyncWrapper, RxModule, TxModule, ZMQRxOutputModule, ZMQRxWorkerModule, ZMQTxInputModule, ZMQTxWorkerModule, AafhInputModule, BabayagaNLOInputModule, BBBremInputModule, BHWideInputModule, CRYInputModule, EvtGenDecayModule, FragmentationModule, HepMCInputModule, HepMCOutputModule, GeneratedVertexDisplacerModule, GeneratorPreselectionModule, HepevtOutputModule, OverrideGenerationFlagsModule, RemoveMCParticlesModule, KKGenInputModule, KoralWInputModule, PhokharaInputModule, TeeggInputModule, TrepsInputModule, GeometryModule, SoftwareTriggerModule, SoftwareTriggerResultPrinterModule, BKLMAnaModule, BKLMDigitAnalyzerModule, BKLMSimHistogrammerModule, BKLMTrackingModule, EKLMDataCheckerModule, KLMClusterEfficiencyModule, KLMClustersReconstructorModule, KLMDigitizerModule, KLMDQMModule, KLMDQM2Module, KLMPackerModule, KLMReconstructorModule, KLMScintillatorSimulatorModule, KLMUnpackerModule, MasterClassModule, MVAExpertModule, MVAMultipleExpertsModule, AWESOMEBasicModule, PXDBackgroundModule, PXDClustersFromTracksModule, PXDPerformanceModule, PXDSpacePointCreatorModule, CheckErrorEventModule, Convert2RawDetModule, Root2BinaryModule, CDCDedxCorrectionModule, CDCDedxDQMModule, CDCDedxPIDModule, CDCDedxScanModule, CDCDedxSkimModule, CDCDedxSkimCDSTModule, CDCDedxValidationModule, HitLevelInfoWriterModule, DataWriterModule, ECLExpertModule, KLMExpertModule, KlongValidationModule, KLMMuonIDDNNExpertModule, PIDNtupleModule, VXDDedxPIDModule, FullSimModule, FullSimTimingModule, SVDBackgroundModule, SVDChannelMappingModule, SVDHotStripFinderModule, SVDChargeSharingAnalysisModule, SVDClusterQualityEstimatorCalibrationModule, SVDClusterQualityEstimatorModule, SVDCrossTalkFinderModule, svdDumpModule, SVDPackerModule, SVDClusterEvaluationTrueInfoModule, SVDClusterFilterModule, SVDEventT0PerformanceTTreeModule, SVDMaxStripTTreeModule, SVDPerformanceTTreeModule, SVDShaperDigitsFromTracksModule, SVDCoGTimeEstimatorModule, SVDDataFormatCheckModule, SVD3SamplesEmulatorModule, SVDDigitizerModule, SVDTriggerQualityGeneratorModule, SVDSpacePointCreatorModule, SVDSpacePointQICalibrationModule, TOPAlignerModule, TOPBackgroundModule, TOPBunchFinderModule, TOPChannelT0CalibratorModule, TOPChannelT0MCModule, TOPCommonT0CalibratorModule, TOPCosmicT0FinderModule, TOPTriggerDigitizerModule, TOPDoublePulseGeneratorModule, TOPGainEfficiencyCalculatorModule, TOPLaserHitSelectorModule, TOPInterimFENtupleModule, TOPLaserCalibratorModule, TOPLLScannerModule, TOPMCTrackMakerModule, TOPModuleT0CalibratorModule, TOPNtupleModule, TOPPackerModule, TOPPDFCheckerModule, TOPRawDigitConverterModule, TOPRingPlotterModule, TOPTBCComparatorModule, TOPTimeBaseCalibratorModule, TOPUnpackerModule, TOPWaveformFeatureExtractorModule, TOPXTalkChargeShareSetterModule, ExtModule, GenfitVisModule, BeamSpotMonitorModule, KinkFinderModule, Chi2MCTrackMatcherModule, MCV0MatcherModule, MCTrackCandClassifierModule, MuidModule, ROIReadTestModule, SVDROIFinderAnalysisDataModule, SVDROIFinderAnalysisModule, SVDROIFinderModule, CurlingTrackCandSplitterModule, GFTC2SPTCConverterModule, PhaseSpaceAnalysisModule, RT2SPTCConverterModule, SpacePoint2TrueHitConnectorModule, SpacePointCreatorTestModule, SPTC2GFTCConverterModule, SPTCRefereeModule, TCConvertersTestModule, StandardTrackingPerformanceModule, TrackFilterModule, CollectorTestModule, StudyMaterialEffectsModule, EffPlotsModule, FillTrackFitNtupleModule, HitXPModule, TrackingPerformanceEvaluationModule, V0findingPerformanceEvaluationModule, TrackQETrainingDataCollectorModule, V0FinderModule, SecMapTrainerBaseModule, SecMapTrainerVXDTFModule, TrackFinderVXDAnalizerModule, VXDQETrainingDataCollectorModule, FastBDTClassifierAnalyzerModule, FastBDTClassifierTrainingModule, MLSegmentNetworkProducerModule, NoKickCutsEvalModule, SegmentNetworkAnalyzerModule, SPTC2RTConverterModule, VXDTFTrainingDataCollectorModule, FindletModule< AFindlet >, FindletModule< HitBasedT0Extractor >, FindletModule< CKFToSVDSeedFindlet >, FindletModule< CKFToSVDFindlet >, FindletModule< CosmicsTrackMergerFindlet >, FindletModule< DATCONFPGAFindlet >, FindletModule< MCVXDCDCTrackMergerFindlet >, FindletModule< vxdHoughTracking::SVDHoughTracking >, FindletModule< CKFToCDCFindlet >, FindletModule< CKFToCDCFromEclFindlet >, FindletModule< CKFToPXDFindlet >, FindletModule< AsicBackgroundLibraryCreator >, FindletModule< CDCTrackingEventLevelMdstInfoFillerFindlet >, FindletModule< AxialSegmentPairCreator >, FindletModule< AxialStraightTrackFinder >, FindletModule< AxialTrackCreatorMCTruth >, FindletModule< AxialTrackCreatorSegmentHough >, FindletModule< AxialTrackFinderHough >, FindletModule< AxialTrackFinderLegendre >, FindletModule< ClusterBackgroundDetector >, FindletModule< ClusterPreparer >, FindletModule< ClusterRefiner< BridgingWireHitRelationFilter > >, FindletModule< FacetCreator >, FindletModule< HitReclaimer >, FindletModule< MonopoleAxialTrackFinderLegendre >, FindletModule< MonopoleStereoHitFinder >, FindletModule< MonopoleStereoHitFinderQuadratic >, FindletModule< SegmentCreatorFacetAutomaton >, FindletModule< SegmentCreatorMCTruth >, FindletModule< SegmentFinderFacetAutomaton >, FindletModule< SegmentFitter >, FindletModule< SegmentLinker >, FindletModule< SegmentOrienter >, FindletModule< SegmentPairCreator >, FindletModule< SegmentRejecter >, FindletModule< SegmentTrackCombiner >, FindletModule< SegmentTripleCreator >, FindletModule< StereoHitFinder >, FindletModule< SuperClusterCreator >, FindletModule< TrackCombiner >, FindletModule< TrackCreatorSegmentPairAutomaton >, FindletModule< TrackCreatorSegmentTripleAutomaton >, FindletModule< TrackCreatorSingleSegments >, FindletModule< TrackExporter >, FindletModule< TrackFinderAutomaton >, FindletModule< TrackFinderCosmics >, FindletModule< TrackFinder >, FindletModule< TrackFinderSegmentPairAutomaton >, FindletModule< TrackFinderSegmentTripleAutomaton >, FindletModule< TrackFlightTimeAdjuster >, FindletModule< TrackLinker >, FindletModule< TrackOrienter >, FindletModule< TrackQualityAsserter >, FindletModule< TrackQualityEstimator >, FindletModule< TrackRejecter >, FindletModule< WireHitBackgroundDetector >, FindletModule< WireHitCreator >, FindletModule< WireHitPreparer >, CDCTriggerNeuroDQMModule, CDCTriggerNeuroDQMOnlineModule, CDCTriggerHoughETFModule, CDCTrigger2DFinderModule, CDCTriggerNDFinderModule, CDCTriggerNeuroDataModule, CDCTriggerNeuroIDHistModule, CDCTriggerTSFFirmwareModule, CDCTriggerTSFModule, TRGCDCModule, TRGCDCETFUnpackerModule, TRGCDCT2DDQMModule, TRGCDCT3DConverterModule, TRGCDCT3DDQMModule, TRGCDCT3DUnpackerModule, TRGCDCTSFDQMModule, TRGCDCTSFUnpackerModule, TRGCDCTSStreamModule, CDCTriggerUnpackerModule, MCMatcherTRGECLModule, TRGECLFAMModule, TRGECLModule, TRGECLBGTCHitModule, TRGECLDQMModule, TRGECLQAMModule, TRGECLRawdataAnalysisModule, TRGECLTimingCalModule, TRGECLUnpackerModule, TRGGDLModule, TRGGDLDQMModule, TRGGDLDSTModule, TRGGDLSummaryModule, TRGGDLUnpackerModule, TRGGRLMatchModule, TRGGRLModule, TRGGRLProjectsModule, TRGGRLDQMModule, GRLNeuroModule, GRLNeuroTrainerModule, TRGGRLUnpackerModule, KLMTriggerModule, TRGTOPDQMModule, TRGTOPTRD2TTSConverterModule, TRGTOPUnpackerModule, TRGTOPUnpackerWaveformModule, TRGTOPWaveformPlotterModule, TRGRAWDATAModule, VXDMisalignmentModule, DQMHistAnalysisARICHModule, DQMHistAnalysisARICHMonObjModule, DQMHistAnalysisCDCDedxModule, DQMHistAnalysisCDCEpicsModule, DQMHistAnalysisCDCMonObjModule, DQMHistAnalysisECLModule, DQMHistAnalysisECLConnectedRegionsModule, DQMHistAnalysisECLOutOfTimeDigitsModule, DQMHistAnalysisECLShapersModule, DQMHistAnalysisECLSummaryModule, DQMHistAnalysisEpicsExampleModule, DQMHistAnalysisEventT0EfficiencyModule, DQMHistAnalysisEventT0TriggerJitterModule, DQMHistAnalysisExampleModule, DQMHistAnalysisExampleFlagsModule, DQMHistAnalysisHLTModule, DQMHistAnalysisHLTMonObjModule, DQMHistAnalysisInput2Module, DQMHistAnalysisInputPVSrvModule, DQMHistAnalysisInputTestModule, DQMHistAnalysisKLMModule, DQMHistAnalysisMiraBelleModule, DQMHistAnalysisMonObjModule, DQMHistAnalysisOutputFileModule, DQMHistAnalysisOutputMonObjModule, DQMHistAnalysisOutputRelayMsgModule, DQMHistAnalysisPeakModule, DQMHistAnalysisPXDFitsModule, DQMHistAnalysisSVDEfficiencyModule, DQMHistAnalysisSVDGeneralModule, DQMHistAnalysisSVDOnMiraBelleModule, DQMHistAnalysisTOPModule, DQMHistAnalysisTrackingAbortModule, DQMHistAnalysisTRGECLModule, DQMHistAnalysisTRGGDLModule, DQMHistAutoCanvasModule, DQMHistComparitorModule, DQMHistDeltaHistoModule, DQMHistReferenceModule, DQMHistSnapshotsModule, PyModule, PXDBgTupleProducerModule, PXDMCBgTupleProducerModule, PXDDQMEfficiencyNtupleModule, PXDDQMEfficiencyNtupleSelftrackModule, PXDDQMTrackRawNtupleModule, PXDPackerErrModule, PXDPackerModule, PXDReadRawBonnDAQModule, PXDReadRawBonnDAQMatchedModule, PXDReadRawONSENModule, PXDUnpackerModule, PXDUnpackerOldModule, PXDUnpackerOTModule, SVDDQMClustersOnTrackModule, SVDDQMExpressRecoModule, PXDROIFinderAnalysisModule, ROISenderModule, DQMHistAnalysisDeltaEpicsMonObjExampleModule, DQMHistAnalysisDeltaTestModule, DQMHistAnalysisPhysicsModule, DQMHistAnalysisPXDChargeModule, DQMHistAnalysisPXDCMModule, DQMHistAnalysisPXDDAQModule, DQMHistAnalysisPXDEffModule, DQMHistAnalysisPXDERModule, DQMHistAnalysisPXDInjectionModule, DQMHistAnalysisPXDReductionModule, DQMHistAnalysisPXDTrackChargeModule, DQMHistAnalysisRooFitExampleModule, DQMHistAnalysisRunNrModule, DQMHistAnalysisTRGModule, DQMHistOutputToEPICSModule, and ROIDQMModule.

Definition at line 176 of file Module.h.

176{};

◆ writeClusters()

void writeClusters ( VxdID  sensorID)
private

Write clusters to collection.

This method will check all cluster candidates and write valid ones to the datastore

Definition at line 302 of file PXDClusterizerModule.cc.

303{
304 if (m_cache->empty())
305 return;
306
307 //Get all datastore elements
308 const StoreArray<MCParticle> storeMCParticles(m_storeMCParticlesName);
309 const StoreArray<PXDDigit> storeDigits(m_storeDigitsName);
310 const StoreArray<PXDTrueHit> storeTrueHits(m_storeTrueHitsName);
312 RelationArray relClusterMCParticle(storeClusters, storeMCParticles,
314 RelationArray relClusterDigit(storeClusters, storeDigits,
316 RelationArray relClusterTrueHit(storeClusters, storeTrueHits,
318
319 //Get Geometry information
320 const SensorInfo& info = dynamic_cast<const SensorInfo&>(VXD::GeoCache::getInstance().getSensorInfo(
321 sensorID));
322
323 map<unsigned int, float> mc_relations;
324 map<unsigned int, float> truehit_relations;
325 vector<pair<unsigned int, float> > digit_weights;
326
327
328 for (ClusterCandidate& cls : *m_cache) {
329 //Check for noise cuts
330 if (!(cls.size() > 0 && m_noiseMap(cls.getCharge(), m_cutCluster) && m_noiseMap(cls.getSeed(), m_cutSeed))) continue;
331
332 double rho(0);
333 ClusterProjection projU, projV;
334 mc_relations.clear();
335 truehit_relations.clear();
336 digit_weights.clear();
337 digit_weights.reserve(cls.size());
338
339 const Pixel& seed = cls.getSeed();
340
341 for (const PXD::Pixel& px : cls.pixels()) {
342 //Add the Pixel information to the two projections
343 projU.add(px.getU(), info.getUCellPosition(px.getU()), px.getCharge());
344 projV.add(px.getV(), info.getVCellPosition(px.getV()), px.getCharge());
345
346 //Obtain relations from MCParticles
347 fillRelationMap(m_mcRelation, mc_relations, px.getIndex());
348 //Obtain relations from PXDTrueHits
349 fillRelationMap(m_trueRelation, truehit_relations, px.getIndex());
350 //Save the weight of the digits for the Cluster->Digit relation
351 digit_weights.emplace_back(px.getIndex(), px.getCharge());
352 }
353 projU.finalize();
354 projV.finalize();
355
356 const double pitchU = info.getUPitch();
357 const double pitchV = info.getVPitch(projV.getPos());
358 // Calculate shape correlation coefficient: only for non-trivial shapes
359 if (projU.getSize() > 1 && projV.getSize() > 1) {
360 // Add in-pixel position noise to smear the correlation
361 double posUU = cls.getCharge() * pitchU * pitchU / 12.0;
362 double posVV = cls.getCharge() * pitchV * pitchV / 12.0;
363 double posUV(0);
364 for (const Pixel& px : cls.pixels()) {
365 const double du = info.getUCellPosition(px.getU()) - projU.getPos();
366 const double dv = info.getVCellPosition(px.getV()) - projV.getPos();
367 posUU += px.getCharge() * du * du;
368 posVV += px.getCharge() * dv * dv;
369 posUV += px.getCharge() * du * dv;
370 }
371 rho = posUV / sqrt(posUU * posVV);
372 }
373
374 //Calculate position and error with u as primary axis, fixed pitch size
375 calculatePositionError(cls, projU, projV, pitchU, pitchU, pitchU);
376 //Calculate position and error with v as primary axis, possibly different pitch sizes
377 calculatePositionError(cls, projV, projU, info.getVPitch(projV.getMinPos()), pitchV, info.getVPitch(projV.getMaxPos()));
378
379 if (m_errorFromDB) { // Overwrite cluster position error with value from DB (keep the above calculation untouched for now)
380 unsigned int uID = info.getUCellID(projU.getPos());
381 unsigned int vID = info.getVCellID(projV.getPos());
382 bool isUedge = PXD::isClusterAtUEdge(sensorID, projU.getMinCell(), projU.getMaxCell());
383 bool isVedge = (PXD::isClusterAtVEdge(sensorID, projV.getMinCell(), projV.getMaxCell())
384 || PXD::isClusterAtLadderJoint(sensorID, projV.getMinCell(), projV.getMaxCell()));
385 assignPositionErrorFromDB(projU, **m_clusterPositionErrorUPar, sensorID, uID, vID, pitchU, isUedge, isVedge);
386 assignPositionErrorFromDB(projV, **m_clusterPositionErrorVPar, sensorID, uID, vID, pitchV, isUedge, isVedge);
387 }
388
389 ROOT::Math::XYZVector lorentzShift = info.getLorentzShift(projU.getPos(), projV.getPos());
390 projU.setPos(projU.getPos() - lorentzShift.X());
391 projV.setPos(projV.getPos() - lorentzShift.Y());
392 B2DEBUG(20, "Lorentz shift: " << lorentzShift.X() << " " << lorentzShift.Y());
393
394 // Pre classification of cluster looking at pitch type of pixels and if they touch sensor edges
395 int clusterkind = PXDClusterPositionEstimator::getInstance().getClusterkind(cls.pixels(), sensorID);
396
397 // Compute sorted set of pixel
398 // FIXME: I am not 100% sure if cls.pixels() are sorted
399 set<Pixel> pixelSet(cls.pixels().begin(), cls.pixels().end());
400
401 // Compute classifier variables needed for later retrival of position correction in PXD CKF
402 vector<float> sectorEtaValues = {0, 0, 0, 0};
403 sectorEtaValues[0] = PXDClusterPositionEstimator::getInstance().computeEta(pixelSet, projV.getMinCell(), projV.getSize(), +1.0,
404 +1.0);
405 sectorEtaValues[1] = PXDClusterPositionEstimator::getInstance().computeEta(pixelSet, projV.getMinCell(), projV.getSize(), -1.0,
406 +1.0);
407 sectorEtaValues[2] = PXDClusterPositionEstimator::getInstance().computeEta(pixelSet, projV.getMinCell(), projV.getSize(), -1.0,
408 -1.0);
409 sectorEtaValues[3] = PXDClusterPositionEstimator::getInstance().computeEta(pixelSet, projV.getMinCell(), projV.getSize(), +1.0,
410 -1.0);
411
412 vector<int> sectorShapeIndices = { -1, -1, -1, -1};
413 sectorShapeIndices[0] = PXDClusterPositionEstimator::getInstance().computeShapeIndex(pixelSet, projU.getMinCell(),
414 projV.getMinCell(), projV.getSize(), +1.0, +1.0);
415 sectorShapeIndices[1] = PXDClusterPositionEstimator::getInstance().computeShapeIndex(pixelSet, projU.getMinCell(),
416 projV.getMinCell(), projV.getSize(), -1.0, +1.0);
417 sectorShapeIndices[2] = PXDClusterPositionEstimator::getInstance().computeShapeIndex(pixelSet, projU.getMinCell(),
418 projV.getMinCell(), projV.getSize(), -1.0, -1.0);
419 sectorShapeIndices[3] = PXDClusterPositionEstimator::getInstance().computeShapeIndex(pixelSet, projU.getMinCell(),
420 projV.getMinCell(), projV.getSize(), +1.0, -1.0);
421
422 //Store Cluster into Datastore ...
423 int clsIndex = storeClusters.getEntries();
424 storeClusters.appendNew(sensorID, projU.getPos(), projV.getPos(), projU.getError(), projV.getError(),
425 rho, cls.getCharge(), seed.getCharge(),
426 cls.size(), projU.getSize(), projV.getSize(), projU.getMinCell(), projV.getMinCell(), clusterkind,
427 sectorEtaValues, sectorShapeIndices
428 );
429
430 //Create Relations to this Digit
431 if (!mc_relations.empty()) relClusterMCParticle.add(clsIndex, mc_relations.begin(), mc_relations.end());
432 if (!truehit_relations.empty()) relClusterTrueHit.add(clsIndex, truehit_relations.begin(), truehit_relations.end());
433 relClusterDigit.add(clsIndex, digit_weights.begin(), digit_weights.end());
434 }
435
436 m_cache->clear();
437}
Class representing a possible cluster during clustering of the PXD It supports merging of different c...
Helper struct to collect information about the 1D projection of a Pixel cluster.
void add(unsigned int cell, float position, float charge)
Add Pixel information to the projection.
void finalize()
Finish calculation of center of gravity and set correct cluster size.
unsigned int getMinCell() const
Return the minimum cell part of the cluster.
unsigned int getMaxCell() const
Return the maximum cell part of the cluster.
double getError() const
Return the error of the cluster.
double getPos() const
Return the projected position of the cluster.
static PXDClusterPositionEstimator & getInstance()
Main (and only) way to access the PXDClusterPositionEstimator.
float computeEta(const std::set< Pixel > &pixels, int vStart, int vSize, double thetaU, double thetaV) const
Return the normed charge ratio between head and tail pixels (size>=2) or the charge of the seed (size...
int computeShapeIndex(const std::set< Pixel > &pixels, int uStart, int vStart, int vSize, double thetaU, double thetaV) const
Return the shape index of the pixels.
int getClusterkind(const PXDCluster &cluster) const
Return kind of cluster needed to find cluster position correction.
void calculatePositionError(const ClusterCandidate &cls, ClusterProjection &primary, const ClusterProjection &secondary, double minPitch, double centerPitch, double maxPitch)
Calculate position and error for a given cluster.
void fillRelationMap(const RelationLookup &lookup, std::map< unsigned int, float > &relation, unsigned int index)
Add the relation from a given PXDDigit index to a map.
void assignPositionErrorFromDB(ClusterProjection &primary, PXDClusterPositionErrorPar errorPar, VxdID sensorID, unsigned int uCell, unsigned int vCell, double centerPitch, bool isAtUEdge=false, bool isAtVEdge=false, bool isAdjacentDead=false)
Assign position error for a given cluster from DB.
Specific implementation of SensorInfo for PXD Sensors which provides additional pixel specific inform...
Definition: SensorInfo.h:23
const SensorInfoBase & getSensorInfo(Belle2::VxdID id) const
Return a referecne to the SensorInfo of a given SensorID.
Definition: GeoCache.cc:67
static GeoCache & getInstance()
Return a reference to the singleton instance.
Definition: GeoCache.cc:214
bool isClusterAtUEdge(VxdID id, unsigned int umin, unsigned int umax)
Helper function to check if one of the end pixels are at the edge of the sensor.
Definition: PXDUtilities.h:125
bool isClusterAtVEdge(VxdID id, unsigned int vmin, unsigned int vmax)
Helper function to check if one of the end pixels are at the edge of the sensor.
Definition: PXDUtilities.h:136
bool isClusterAtLadderJoint(VxdID id, unsigned int vmin, unsigned int vmax)
Helper function to check if one of the end pixels are at the ladder joint.
Definition: PXDUtilities.h:148

Member Data Documentation

◆ m_cache

std::unique_ptr<ClusterCache> m_cache
private

cache of the last seen clusters to speed up clustering

Definition at line 145 of file PXDClusterizerModule.h.

◆ m_clusterCacheSize

int m_clusterCacheSize
private

Size of cluster Cache (0 = default)

Definition at line 143 of file PXDClusterizerModule.h.

◆ m_clusterPositionErrorUPar

std::unique_ptr<DBObjPtr<PXDClusterPositionErrorPar> > m_clusterPositionErrorUPar
private

DB object for cluster posotion errors in U.

Definition at line 161 of file PXDClusterizerModule.h.

◆ m_clusterPositionErrorVPar

std::unique_ptr<DBObjPtr<PXDClusterPositionErrorPar> > m_clusterPositionErrorVPar
private

DB object for cluster posotion errors in V.

Definition at line 163 of file PXDClusterizerModule.h.

◆ m_conditions

std::vector<ModuleCondition> m_conditions
privateinherited

Module condition, only non-null if set.

Definition at line 521 of file Module.h.

◆ m_createPXDClustersForAbortedTrackingEvents

bool m_createPXDClustersForAbortedTrackingEvents = false
private

bool to override the EventLevelTrackingInfo abort flag decision

Definition at line 167 of file PXDClusterizerModule.h.

◆ m_cutAdjacent

double m_cutAdjacent
private

Noise cut in sigma.

Definition at line 115 of file PXDClusterizerModule.h.

◆ m_cutAdjacentSignal

double m_cutAdjacentSignal
private

Signal in ADU for Adjacent cut, basically m_elNoise*m_cutAdjacent.

Definition at line 119 of file PXDClusterizerModule.h.

◆ m_cutCluster

double m_cutCluster
private

Cluster cut in sigma.

Definition at line 117 of file PXDClusterizerModule.h.

◆ m_cutSeed

double m_cutSeed
private

Seed cut in sigma.

Definition at line 113 of file PXDClusterizerModule.h.

◆ m_description

std::string m_description
privateinherited

The description of the module.

Definition at line 511 of file Module.h.

◆ m_elNoise

double m_elNoise
private

Noise in ADU.

Definition at line 111 of file PXDClusterizerModule.h.

◆ m_errorFromDB

bool m_errorFromDB
private

Flag to set cluster position error from DB (default = true)

Definition at line 155 of file PXDClusterizerModule.h.

◆ m_eventLevelTrackingInfo

StoreObjPtr<EventLevelTrackingInfo> m_eventLevelTrackingInfo
private

StoreObject to access the event level tracking information.

Definition at line 165 of file PXDClusterizerModule.h.

◆ m_hasReturnValue

bool m_hasReturnValue
privateinherited

True, if the return value is set.

Definition at line 518 of file Module.h.

◆ m_logConfig

LogConfig m_logConfig
privateinherited

The log system configuration of the module.

Definition at line 514 of file Module.h.

◆ m_mcRelation

RelationLookup m_mcRelation
private

Lookup table for PXDDigit->MCParticle relation.

Definition at line 150 of file PXDClusterizerModule.h.

◆ m_moduleParamList

ModuleParamList m_moduleParamList
privateinherited

List storing and managing all parameter of the module.

Definition at line 516 of file Module.h.

◆ m_name

std::string m_name
privateinherited

The name of the module, saved as a string (user-modifiable)

Definition at line 508 of file Module.h.

◆ m_noiseMap

NoiseMap m_noiseMap
private

Noise map for the currently active sensor.

Definition at line 147 of file PXDClusterizerModule.h.

◆ m_package

std::string m_package
privateinherited

Package this module is found in (may be empty).

Definition at line 510 of file Module.h.

◆ m_positionErrorUName

std::string m_positionErrorUName
private

Name of the DB payload containing cluster posotion errors in U.

Definition at line 157 of file PXDClusterizerModule.h.

◆ m_positionErrorVName

std::string m_positionErrorVName
private

Name of the DB payload containing cluster posotion errors in V.

Definition at line 159 of file PXDClusterizerModule.h.

◆ m_propertyFlags

unsigned int m_propertyFlags
privateinherited

The properties of the module as bitwise or (with |) of EModulePropFlags.

Definition at line 512 of file Module.h.

◆ m_relClusterDigitName

std::string m_relClusterDigitName
private

Name of the relation between PXDClusters and PXDDigits.

Definition at line 133 of file PXDClusterizerModule.h.

◆ m_relClusterMCParticleName

std::string m_relClusterMCParticleName
private

Name of the relation between PXDClusters and MCParticles.

Definition at line 131 of file PXDClusterizerModule.h.

◆ m_relClusterTrueHitName

std::string m_relClusterTrueHitName
private

Name of the relation between PXDClusters and PXDTrueHits.

Definition at line 137 of file PXDClusterizerModule.h.

◆ m_relDigitMCParticleName

std::string m_relDigitMCParticleName
private

Name of the relation between PXDDigits and MCParticles.

Definition at line 129 of file PXDClusterizerModule.h.

◆ m_relDigitTrueHitName

std::string m_relDigitTrueHitName
private

Name of the relation between PXDDigits and PXDTrueHits.

Definition at line 135 of file PXDClusterizerModule.h.

◆ m_returnValue

int m_returnValue
privateinherited

The return value.

Definition at line 519 of file Module.h.

◆ m_sizeHeadTail

int m_sizeHeadTail
private

Size of the cluster at which we switch from Center of Gravity to Analog Head Tail.

Definition at line 140 of file PXDClusterizerModule.h.

◆ m_storeClustersName

std::string m_storeClustersName
private

Name of the collection to use for the PXDClusters.

Definition at line 123 of file PXDClusterizerModule.h.

◆ m_storeDigitsName

std::string m_storeDigitsName
private

Name of the collection to use for the PXDDigits.

Definition at line 121 of file PXDClusterizerModule.h.

◆ m_storeMCParticlesName

std::string m_storeMCParticlesName
private

Name of the collection to use for the MCParticles.

Definition at line 127 of file PXDClusterizerModule.h.

◆ m_storeTrueHitsName

std::string m_storeTrueHitsName
private

Name of the collection to use for the PXDTrueHits.

Definition at line 125 of file PXDClusterizerModule.h.

◆ m_trueRelation

RelationLookup m_trueRelation
private

Lookup table for PXDDigit->PXDTrueHit relation.

Definition at line 152 of file PXDClusterizerModule.h.

◆ m_type

std::string m_type
privateinherited

The type of the module, saved as a string.

Definition at line 509 of file Module.h.


The documentation for this class was generated from the following files: